Erwiniaceae bacterium PD-1 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Erwiniaceae bacterium PD-1 RM systems
Ref: Lee,C.W. and Kim,J. unpublished
REBASE ref # 30434
| Sequence length: | GenBank #: | |
| Chromosome: | 4,617,009 bp | CP054212 |
| plasmid pPD-1: | 88,619 bp | CP054213 |
REBASE acronym: EbaPD1
Org_num: 40370
All begin PMPD1_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 599 | site-specific integrase | |||
| 600 | M | M.Kqu142ORF5700P (77% identity) | M.EbaPD1ORF600P | |
| 601 | M48 family metallopeptidase | |||
| 601 | M48 family metallopeptidase | |||
| 602 | R | KaeP1ORF21945P (99% identity) | EbaPD1ORF606P | |
| 603 | DUF262 domain-containing protein | |||
| 604 | DUF262 domain-containing protein | |||
| 605 | S | S.SenTS7ORF21290P (73% identity) | S.EbaPD1ORF606P | |
| 606 | M | M.Esp368ORF18160P (93% identity) | M.EbaPD1ORF606P | |
| 608 | colicin-N | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 327 | SPOR domain-containing protein | |||
| 328 | M | M.Min3227DamP (84% identity) | M.EbaPD1DamP | |
| 329 | Ribulose-phosphate 3-epimerase | |||
| 2486 | 155 aa hypothetical protein | |||
| 2487 | M | M2.EapW038ORF11240P (57% identity) | M.EbaPD1ORF2487P | |
| 2488 | 115 aa hypothetical protein | |||
| 2657 | drug/metabolite exporter YedA | |||
| 2658 | V | V.Pal11ZDcmP (71% identity) | V.EbaPD1DcmP | |
| 2659 | M | M.Eto1220DcmP (82% identity) | M.EbaPD1DcmP | |
| 2660 | Epoxyqueuosine reductase QueH | |||
| 3135 | 122 aa hypothetical protein | |||
| 3136 | M | M.EtrSCR3ORF6940P (86% identity) | M.EbaPD1ORF3136P | |
| 3137 | 98 aa hypothetical protein | |||
| plasmid pPD-1 | ||||
| 4442 | 73 aa hypothetical protein | |||
| 4443 | M | M.Sen31783ORF24920P (79% identity) | M.EbaPD1ORF4443P | |
| 4444 | 113 aa hypothetical protein | |||