Escherichia coli NEB5-alpha_F'Iq |
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Putative Escherichia coli NEB5-alpha_F'Iq RM systems
Ref: Anton,B.P. and Raleigh,E.A. Genome Announc 4 (6), e01245-16 (2016)
REBASE ref # 23082
Complete sequence: 4,585,413 bp
GenBank #: CP053607
REBASE acronym: EcoNEB10a
Org_num: 61172
All begin HO392_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5875 | DUF4060 family protein | |||
| ??? | M | M.EcoNEB10bORF6575P (100% identity) | M.EcoNEB10aORF5880P | |
| 5885 | DUF1317 family protein | |||
| 9815 | drug/metabolite exporter YedA | |||
| 9820 | V | V.SflFF64DcmP (100% identity) | CCWGG | V.EcoNEB10aDcmP |
| 9825 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoNEB10aDcmP |
| 9830 | phosphohydrolase | |||
| 16295 | DNA-binding transcriptional regulator Fis | |||
| 16300 | M | M.SflSTLE4ORF2240P (100% identity) | ATGCAT | M.EcoNEB10aORF16300P |
| 16305 | DUF2556 family protein | |||
| 16920 | ribulose-phosphate 3-epimerase | |||
| 16925 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoNEB10aDamP |
| 16930 | cell division protein DamX | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5340 | site-specific DNA recombinase | |||
| 5345 | R | SsoSE61ORF22640P (100% identity) | YCGR | EcoNEB10aORF5345P |
| 5350 | isocitrate dehydrogenase | |||
| 21795 | 906 aa hypothetical protein | |||
| 21800 | R | SenHNK130McrCP (100% identity) | EcoNEB10aMcrCP | |
| 21805 | R | SenHNK130McrBP (100% identity) | EcoNEB10aMcrBP | |
| 21810 | endoribonuclease SymE | |||
| 21825 | type I restriction-modification system | |||
| 21830 | R | SenHNK130MrrP (100% identity) | EcoNEB10aMrrP | |
| 21835 | GTPase | |||