Escherichia coli O157:H7 BB24-1 |
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Putative Escherichia coli O157:H7 BB24-1 RM systems
Ref: Bono,J.L. unpublished
REBASE ref # 30303
| Sequence length: | GenBank #: | |
| Chromosome: | 5,609,172 bp | CP038402 |
| plasmid pBB24-1: | 95,604 bp | CP038404 |
REBASE acronym: EcoBB241
Org_num: 40022
All begin E4U87_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 25530 | DUF262 domain-containing protein | |||
| 25535 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | EcoBB241ORF25540P |
| 25540 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.EcoBB241ORF25540P |
| 25545 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.EcoBB241ORF25540P |
| 25550 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2405 | cell division protein DamX | |||
| 2410 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoBB241DamP |
| 2415 | ribulose-phosphate 3-epimerase | |||
| 2930 | DUF2556 domain-containing protein | |||
| 2935 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.EcoBB241ORF2935P |
| 2940 | DNA-binding transcriptional regulator Fis | |||
| 8955 | recombination protein NinB | |||
| 8960 | M | M.Eph2851ORFAP (100% identity) | GATC | M.EcoBB241ORF10280P |
| 8965 | NinE family protein | |||
| 11170 | phosphohydrolase | |||
| 11175 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoBB241DcmP |
| 11180 | V | V.EcosPA8DcmP (100% identity) | V.EcoBB241DcmP | |
| 11185 | drug/metabolite exporter YedA | |||
| 14155 | TrmB family transcriptional regulator | |||
| 14160 | M | M.EcoZ1836ORF13250P (100% identity) | M.EcoBB241ORF14160P | |
| 14165 | DUF1737 domain-containing protein | |||
| 16080 | 61 aa hypothetical protein | |||
| 16095 | M | M.EcosPA8ORF27255P (100% identity) | M.EcoBB241ORF16095P | |
| 16100 | TrmB family transcriptional regulator | |||
| 23830 | LexA family transcriptional regulator | |||
| 23835 | M | M.EcoZ1836ORF22690P (100% identity) | GATC | M.EcoBB241ORF23835P |
| 23840 | PerC family transcriptional regulator | |||
| 25775 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | EcoBB241ORF25775P |
| 25780 | DEAD/DEAH box helicase | |||
| 25810 | N-acetylneuraminate epimerase | |||
| 25815 | R | Ecos1613ORF26795P (100% identity) | EcoBB241ORF25815P | |
| 25820 | transposase | |||
| 25895 | 87 aa hypothetical protein | |||
| 25900 | M | M.EcoZ1836ORF24740P (100% identity) | RGGNCCY | M.EcoBB241ORF25900P |
| 25905 | R | EcoZ1836ORF24740P (100% identity) | RGGNCCY | EcoBB241ORF25900P |
| 25910 | C | C.EcoZ1836ORF24740P (100% identity) | CTAAGNNNNNCTTAG | C.EcoBB241ORF25900P |
| 25915 | DUF4102 domain-containing protein | |||
| plasmid pBB24-1 | ||||
| 29085 | 101 aa hypothetical protein | |||
| 29090 | M | M.EcosPA8ORF27775P (100% identity) | M.EcoBB241ORF29090P | |
| 29095 | 73 aa hypothetical protein | |||