Escherichia coli O157:H7 DEC5D |
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Putative Escherichia coli O157:H7 DEC5D RM systems
Ref: Bono,J.L. unpublished
REBASE ref # 30303
| Sequence length: | GenBank #: | |
| Chromosome: | 5,195,683 bp | CP038386 |
| plasmid pDEC5D-3: | 57,827 bp | CP038388 |
REBASE acronym: EcoDEC5D
Org_num: 9043
All begin E3157_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21960 | DUF262 domain-containing protein | |||
| 21965 | R | EcoTB182AORF22480P (100% identity) | CACNNNNNNNCTGG | EcoDEC5DORF229P |
| 21970 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.EcoDEC5DORF229P |
| 21975 | S | S.EcoTB182AORF22480P (100% identity) | CACNNNNNNNCTGG | S.EcoDEC5DORF229P |
| 21980 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2335 | cell division protein DamX | |||
| 2340 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoDEC5DDamP |
| 2345 | ribulose-phosphate 3-epimerase | |||
| 2860 | DUF2556 domain-containing protein | |||
| 2865 | M | M.EcoTB182AORF2865P (100% identity) | ATGCAT | M.EcoDEC5DORF2865P |
| 2870 | DNA-binding transcriptional regulator Fis | |||
| 10160 | phosphohydrolase | |||
| 10165 | M | M.EcoTB182ADcmP (100% identity) | CCWGG | M.EcoDEC5DDcmP |
| 10170 | V | V.EcosPA8DcmP (100% identity) | V.EcoDEC5DDcmP | |
| 10175 | drug/metabolite exporter YedA | |||
| 18385 | DUF1317 family protein | |||
| 18390 | M | M.EcoTB182AORF18900P (100% identity) | GATC | M.EcoDEC5DORF948P |
| 18395 | cell division protein ZapA | |||
| 20160 | NinE family protein | |||
| 20165 | M | M.EcoTB182AORF20675P (100% identity) | GATC | M.EcoDEC5DORF594P |
| 20170 | recombination protein NinB | |||
| 22195 | RM | EcoTB182AORF22705P (100% identity) | GAAABCC | EcoDEC5DORF177P |
| 22200 | DEAD/DEAH box helicase | |||
| 22230 | N-acetylneuraminate epimerase | |||
| 22235 | R | EcoTB182AORF22745P (100% identity) | EcoDEC5DORF22235P | |
| 22240 | transposase | |||
| 22260 | 223 aa hypothetical protein | |||
| 22265 | S | S.EcoTB182AORF22780P (100% identity) | S.EcoDEC5DORF161P | |
| 22270 | M | M.EcoTB182AORF22780P (100% identity) | M.EcoDEC5DORF161P | |
| 22275 | 204 aa hypothetical protein | |||
| 23735 | LexA family transcriptional regulator | |||
| 23740 | M | M.SflLIN17ORF17440P (100% identity) | GATC | M.EcoDEC5DORF5222P |
| 23745 | PerC family transcriptional regulator | |||
| plasmid pDEC5D-3 | ||||
| 25605 | 73 aa hypothetical protein | |||
| 25610 | M | M.EcoTB182AORF25840P (100% identity) | M.EcoDEC5DORFBP | |
| 25615 | 59 aa hypothetical protein | |||