Escherichia coli O157:H7 DEC5E |
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Putative Escherichia coli O157:H7 DEC5E RM systems
Ref: Bono,J.L. unpublished
REBASE ref # 30303
| Sequence length: | GenBank #: | |
| Chromosome: | 5,571,128 bp | CP038383 |
| plasmid pDEC5E-2: | 80,565 bp | CP038385 |
| plasmid pDEC5E-3: | 69,832 bp | CP038384 |
REBASE acronym: EcoDEC5E
Org_num: 9044
All begin E3158_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2345 | cell division protein DamX | |||
| 2350 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoDEC5EDamP |
| 2355 | ribulose-phosphate 3-epimerase | |||
| 2880 | DUF2556 domain-containing protein | |||
| 2885 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.EcoDEC5EORF4047P |
| 2890 | DNA-binding transcriptional regulator Fis | |||
| 6830 | 309 aa hypothetical protein | |||
| 6835 | M | M.EcoR37ORF1720P (100% identity) | M.EcoDEC5EORF6835P | |
| 6840 | VRR-NUC domain-containing protein | |||
| 9445 | recombination protein NinB | |||
| 9450 | M | M.Eph2012ORF32P (100% identity) | GATC | M.EcoDEC5EORF20P |
| 9455 | NinE family protein | |||
| 16415 | drug/metabolite exporter YedA | |||
| 16420 | V | V.EcosPA8DcmP (100% identity) | V.EcoDEC5EDcmP | |
| 16425 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoDEC5EDcmP |
| 16430 | phosphohydrolase | |||
| 16690 | 108 aa hypothetical protein | |||
| 16705 | M | M.EcoR37ORF29110P (100% identity) | A | M.EcoDEC5EORF1281P |
| 16710 | TrmB family transcriptional regulator | |||
| 20685 | DUF1317 family protein | |||
| 20690 | M | M.Sbo812ORFAP (100% identity) | GATC | M.EcoDEC5EORF447P |
| 20695 | cell division protein ZapA | |||
| 24270 | restriction endonuclease | |||
| 24275 | R | EcosS9ORF2810P (100% identity) | GGTCTC | EcoDEC5EORF5424P |
| 24280 | M | M1.EcoR37ORF20055P (100% identity) | GGTCTC | M2.EcoDEC5EORF5424P |
| 24285 | M | M2.EcosEC4ORF20110P (100% identity) | GGTCTC | M1.EcoDEC5EORF5424P |
| 24290 | 75 aa hypothetical protein | |||
| 24675 | 174 aa hypothetical protein | |||
| 24680 | M | M.Sen5773ORF4471P (100% identity) | RCCGGY | M.EcoDEC5EORF24680P |
| 24685 | histidine kinase | |||
| 24690 | 607 aa hypothetical protein | |||
| 24695 | R | Ecos19ORF20635P (100% identity) | EcoDEC5EORF24695P | |
| 24700 | 97 aa hypothetical protein | |||
| 25425 | 211 aa hypothetical protein | |||
| 25430 | R | Mmo12289ORF1444P (100% identity) | GCGCGC | EcoDEC5EORF5192P |
| 25435 | M | M.KquU41ORF24735P (100% identity) | GCGCGC | M.EcoDEC5EORF5192P |
| 25440 | V | V.Kpn22265ORF23705P (99% identity) | V.EcoDEC5EORF5192P | |
| 25445 | conjugal transfer TraD family protein | |||
| plasmid pDEC5E-2 | ||||
| 28635 | 59 aa hypothetical protein | |||
| 28640 | M | M.Xca80ORFEP (100% identity) | M.EcoDEC5EORF3247P | |
| 28645 | 73 aa hypothetical protein | |||
| plasmid pDEC5E-3 | ||||
| 28355 | 73 aa hypothetical protein | |||
| 28360 | M | M.EcoTB182AORF25840P (100% identity) | M.EcoDEC5EORF1420P | |
| 28365 | 59 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24260 | 60 aa hypothetical protein | |||
| 24265 | R | EcosS3McrBP (100% identity) | EcoDEC5EMcrBP | |
| 24270 | R | EcosS9McrCP (100% identity) | EcoDEC5EMcrCP | |
| 24275 | Alw26I/Eco31I/Esp3I family type II restriction | |||