Escherichia coli O157:H7 F7508 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli O157:H7 F7508 RM systems
Ref: Bono,J.L. unpublished
REBASE ref # 30303
| Sequence length: | GenBank #: | |
| Chromosome: | 5,545,879 bp | CP038357 |
| plasmid pF7508-1: | 92,704 bp | CP038359 |
REBASE acronym: EcoF7508
Org_num: 40031
All begin E4U80_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19745 | 64 aa hypothetical protein | |||
| 19750 | M | M.Ecos1613ORF5225P (100% identity) | CCAYNNNNNGTTY | M.EcoF7508ORF19750P |
| 19755 | S | S.Ecos1613ORF5225P (100% identity) | CCAYNNNNNGTTY | S.EcoF7508ORF19750P |
| 19760 | DUF4433 domain-containing protein | |||
| 19765 | Appr-1-p processing protein | |||
| 19770 | R | Ecos1613ORF5225P (100% identity) | CCAYNNNNNGTTY | EcoF7508ORF19750P |
| 19775 | M48 family peptidase | |||
| 25130 | DUF262 domain-containing protein | |||
| 25135 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | EcoF7508ORF25140P |
| 25140 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.EcoF7508ORF25140P |
| 25145 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.EcoF7508ORF25140P |
| 25150 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2335 | cell division protein DamX | |||
| 2340 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoF7508DamP |
| 2345 | ribulose-phosphate 3-epimerase | |||
| 2860 | DUF2556 domain-containing protein | |||
| 2865 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.EcoF7508ORF2865P |
| 2870 | DNA-binding transcriptional regulator Fis | |||
| 9180 | recombination protein NinB | |||
| 9185 | M | M.Eph2851ORFAP (100% identity) | GATC | M.EcoF7508ORF9185P |
| 9190 | NinE family protein | |||
| 10660 | phosphohydrolase | |||
| 10665 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoF7508DcmP |
| 10670 | V | V.EcosPA8DcmP (100% identity) | V.EcoF7508DcmP | |
| 10675 | drug/metabolite exporter YedA | |||
| 14505 | DUF1367 family protein | |||
| 14510 | R | Ecos15739ORF2910P (100% identity) | EcoF7508ORF14520P | |
| 14515 | 329 aa hypothetical protein | |||
| 14520 | M | M.Ecos15739ORF2910P (100% identity) | M.EcoF7508ORF14520P | |
| 14525 | 81 aa hypothetical protein | |||
| 15425 | 61 aa hypothetical protein | |||
| 15440 | M | M.EcosPA8ORF27255P (100% identity) | M.EcoF7508ORF15440P | |
| 15445 | TrmB family transcriptional regulator | |||
| 18475 | NinE family protein | |||
| 18480 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.EcoF7508ORF18480P |
| 18485 | recombination protein NinB | |||
| 25370 | RM | EcoOS292II (100% identity) | GAAABCC | EcoF7508ORF25370P |
| 25375 | DEAD/DEAH box helicase | |||
| 25405 | N-acetylneuraminate epimerase | |||
| 25410 | R | Ecos1613ORF26795P (100% identity) | EcoF7508ORF25410P | |
| 25415 | transposase | |||
| plasmid pF7508-1 | ||||
| 28515 | 59 aa hypothetical protein | |||
| 28520 | M | M.EcosPA8ORF27775P (100% identity) | M.EcoF7508ORF28520P | |
| 28525 | 73 aa hypothetical protein | |||