Escherichia coli O157:H7 N8B7-2 |
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Putative Escherichia coli O157:H7 N8B7-2 RM systems
Ref: Bono,J.L. unpublished
REBASE ref # 30303
| Sequence length: | GenBank #: | |
| Chromosome: | 5,504,820 bp | CP038333 |
| plasmid pN8B7-1: | 94,694 bp | CP038335 |
REBASE acronym: EcoN8B72
Org_num: 40042
All begin E4U68_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24975 | DUF262 domain-containing protein | |||
| 24980 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | EcoN8B72ORF24985P |
| 24985 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.EcoN8B72ORF24985P |
| 24990 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.EcoN8B72ORF24985P |
| 24995 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2340 | cell division protein DamX | |||
| 2345 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoN8B72DamP |
| 2350 | ribulose-phosphate 3-epimerase | |||
| 2865 | DUF2556 domain-containing protein | |||
| 2870 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.EcoN8B72ORF2870P |
| 2875 | DNA-binding transcriptional regulator Fis | |||
| 10220 | recombination protein NinB | |||
| 10225 | M | M.Eph2851ORFAP (100% identity) | GATC | M.EcoN8B72ORF10225P |
| 10230 | NinE family protein | |||
| 12940 | TrmB family transcriptional regulator | |||
| 12945 | M | M.EcosPA8ORF27255P (100% identity) | M.EcoN8B72ORF12945P | |
| 12960 | 61 aa hypothetical protein | |||
| 17735 | drug/metabolite exporter YedA | |||
| 17740 | V | V.EcosPA8DcmP (100% identity) | V.EcoN8B72DcmP | |
| 17745 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoN8B72DcmP |
| 17750 | phosphohydrolase | |||
| 23275 | LexA family transcriptional regulator | |||
| 23280 | M | M.EcoZ1836ORF22690P (100% identity) | GATC | M.EcoN8B72ORF23280P |
| 23285 | PerC family transcriptional regulator | |||
| 25220 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | EcoN8B72ORF25220P |
| 25225 | DEAD/DEAH box helicase | |||
| 25255 | N-acetylneuraminate epimerase | |||
| 25260 | R | Ecos1613ORF26795P (100% identity) | EcoN8B72ORF25260P | |
| 25265 | transposase | |||
| 25340 | 87 aa hypothetical protein | |||
| 25345 | M | M.EcoZ1836ORF24740P (100% identity) | RGGNCCY | M.EcoN8B72ORF25345P |
| 25350 | R | EcoZ1836ORF24740P (100% identity) | RGGNCCY | EcoN8B72ORF25345P |
| 25355 | C | C.EcoZ1836ORF24740P (100% identity) | CTAAGNNNNNCTTAG | C.EcoN8B72ORF25345P |
| 25360 | DUF4102 domain-containing protein | |||
| plasmid pN8B7-1 | ||||
| 28875 | 101 aa hypothetical protein | |||
| 28880 | M | M.EcosPA8ORF27775P (100% identity) | M.EcoN8B72ORF28880P | |
| 28885 | 73 aa hypothetical protein | |||