Bifidobacterium ramosum DSM 100688 |
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Putative Bifidobacterium ramosum DSM 100688 RM systems
Ref: Lugli,G.A. et al. unpublished
REBASE ref # 30247
Contig set: 3,028,921 bp
GenBank #: WBSM00000000 (NZ_WBSM00000000)
REBASE acronym: Bra100688
Org_num: 39839
All begin DSM100688_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1597 | phosphoesterase | |||
| 1598 | S | S3.Bad703BORF8370P (41% identity) | S3.Bra100688ORF1604P | |
| 1599 | integrase | |||
| 1600 | 100 aa hypothetical protein | |||
| 1601 | 77 aa hypothetical protein | |||
| 1602 | 93 aa hypothetical protein | |||
| 1603 | S | S2.BimTam1GORF1747P (40% identity) | S2.Bra100688ORF1604P | |
| ??? | S | S1.PmeBin111ORFDP (42% identity) | S1.Bra100688ORF1604P | |
| 1604 | M | M.Bca31790ORF4240P (98% identity) | M.Bra100688ORF1604P | |
| 1605 | R | BaeTRE17ORF1625P (96% identity) | Bra100688ORF1604P | |
| 1606 | transcription-repair coupling factor | |||
| 1336 | ATPase | |||
| ??? | S | S2.Blo7210ORFBP (44% identity) | S1.Bra100688ORF1339P | |
| ??? | S | S2.Bmy100916ORF1249P (55% identity) | S2.Bra100688ORF1339P | |
| 1339 | M | M.Bgo2034BORF1188P (93% identity) | M.Bra100688ORF1339P | |
| 1340 | S | S.Bla18ORFAP (42% identity) | S3.Bra100688ORF1339P | |
| 1341 | 63 aa hypothetical protein | |||
| 1342 | toxin-antitoxin system, toxin component | |||
| 1343 | R | Bva10BORF2161P (77% identity) | Bra100688ORF1339P | |
| 1344 | ABC transporter ATP-binding protein | |||
| 317 | 107 aa hypothetical protein | |||
| 318 | M | M.Bbi23969ORFBP (96% identity) | M.Bra100688ORF318P | |
| 319 | S | S.Bae26737ORFAP (40% identity) | S.Bra100688ORF318P | |
| 320 | PIN domain-containing protein | |||
| 321 | MerR family transcriptional regulator | |||
| 322 | ATPase | |||
| 323 | R | Bbi23969ORFBP (88% identity) | Bra100688ORF318P | |
| 324 | ATP-dependent Clp protease proteolytic subunit | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2193 | 298 aa hypothetical protein | |||
| 2194 | R | Bca31790ORF4400P (99% identity) | Bra100688ORF2195P | |
| 2195 | M | M.Bca31790ORF4400P (100% identity) | M.Bra100688ORF2195P | |
| 2196 | GTP-binding protein | |||
| 1868 | ATPase | |||
| 1869 | R | BmaUis1BORF412P (45% identity) | Bra100688ORF1870P | |
| 1870 | adenine specific DNA methylase Mod | |||