Bifidobacterium merycicum LMG 11341 |
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Putative Bifidobacterium merycicum LMG 11341 RM systems
Ref: Milani,C. et al. Appl. Environ. Microbiol. 80 (20), 6290-6302 (2014)
REBASE ref # 18068
Contig set: 2,280,234 bp
GenBank #: JGZC00000000 (NZ_JGZC00000000)
REBASE acronym: Bme11341
Org_num: 39809
All begin BMERY_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 807 | peptidase E | |||
| 808 | R | Bad2019ORFBP (72% identity) | Bme11341ORF812P | |
| 809 | S | S.PmeBin227ORFCP (26% identity) | S2.Bme11341ORF812P | |
| 810 | site-specific recombinase, phage integrase | |||
| 811 | S | S.Bad22ORF1031P (92% identity) | S1.Bme11341ORF812P | |
| 812 | M | M.BadZ32ORF6845P (59% identity) | M.Bme11341ORF812P | |
| 813 | 143 aa hypothetical protein | |||
| 836 | 68 aa hypothetical protein | |||
| 837 | R | Bca16992ORF630P (97% identity) | Bme11341ORF843P | |
| 838 | S | S3.Cst13279aORF6195P (47% identity) | S2.Bme11341ORF843P | |
| 839 | 162 aa hypothetical protein | |||
| 840 | 138 aa hypothetical protein | |||
| 841 | 215 aa hypothetical protein | |||
| 842 | S | S2.Ari49626ORF858P (62% identity) | S1.Bme11341ORF843P | |
| 843 | M | M.Bad703BORF3385P (98% identity) | M.Bme11341ORF843P | |
| 844 | phage family integrase | |||
| 966 | 700 aa hypothetical protein | |||
| ??? | R | OscSK9K4ORF3235P (80% identity) | Bme11341ORF971P | |
| 969 | 432 aa hypothetical protein | |||
| 970 | S | S.PmeBin52ORFGP (39% identity) | S.Bme11341ORF971P | |
| 971 | M | M.OscSK9K4ORF3235P (80% identity) | M.Bme11341ORF971P | |
| 972 | 67 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 822 | 868 aa hypothetical protein | |||
| 823 | RM | PmeBin33ORFDP (22% identity) | Bme11341ORF823P | |
| 824 | aminoglycoside 3-N-acetyltransferase | |||
| 174 | 389 aa hypothetical protein | |||
| 175 | R | R2.Ble28807ORFAP (42% identity) | R1.Bme11341ORF176P | |
| 176 | M | M.Bsp20083ORF11930P (80% identity) | M.Bme11341ORF176P | |
| 177 | R | R2.Bsp20083ORF11930P (67% identity) | R2.Bme11341ORF176P | |
| 178 | MFS family major facilitator transporter | |||
| 230 | plasmid ATP-dependent helicase | |||
| 231 | RM | Bfi002ORF7930P (89% identity) | Bme11341ORF231P | |
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 194 | toxin-antitoxin system, antitoxin component, Xre | |||
| 196 | R | PmeBin41McrCP (92% identity) | Bme11341McrCP | |
| 199 | R | Cba4149McrBP (84% identity) | Bme11341McrBP | |
| 200 | filamentation induced by cAMP protein fic | |||