Bifidobacterium criceti Ham19E |
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Putative Bifidobacterium criceti Ham19E RM systems
Ref: Milani,C. et al. ISME J (2017) In press
REBASE ref # 30238
Contig set: 2,155,882 bp
GenBank #: MVOH00000000 (NZ_MVOH00000000)
REBASE acronym: Bcr19E
Org_num: 39818
All begin B1526_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1098 | transposase | |||
| ??? | S | S.BspTRE1ORF5675P (30% identity) | S.Bcr19EORF1099P | |
| 1100 | R | BimTam1GORF1209P (47% identity) | Bcr19EORF1099P | |
| 1101 | 309 aa hypothetical protein | |||
| 1657 | transposase | |||
| 1658 | M | M.TstRKWS1ORF454P (51% identity) | M.Bcr19EORF1658P | |
| 1659 | 154 aa hypothetical protein | |||
| 1727 | S | S.Bcr19EORF1725P (53% identity) | S.Bcr19EORF1728P | |
| 1728 | M | M.BloGORF8015P (91% identity) | M.Bcr19EORF1728P | |
| 1729 | R | BspN4G05ORF4755P (11% identity) | Bcr19EORF1728P | |
| 1724 | type I restriction enzyme, S subunit | |||
| 1725 | S | S.Bcr19EORF1728P (53% identity) | S.Bcr19EORF1725P | |
| 1146 | 81 aa hypothetical protein | |||
| 1147 | R | BpsNjM1ORFAP (94% identity) | Bcr19EORF1148P | |
| 1148 | M | M.BpsNjM1ORFAP (93% identity) | M.Bcr19EORF1148P | |
| 1149 | S | S1.BpsNjM1ORFAP (48% identity) | S1.Bcr19EORF1148P | |
| 1150 | integrase | |||
| 1151 | S | S2.LrhPenORF5125P (45% identity) | S2.Bcr19EORF1148P | |
| 1152 | Serine proteinase inhibitor | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1 | M | M2.Asp2765ORFAP (36% identity) | M.Bcr19EORF1P | |
| 2 | transcriptional regulator | |||
| 1710 | flavoprotein | |||
| ??? | RM | Fpr302ORF1785AP (15% identity) | Bcr19EORF1711P | |
| 53 | ABC transporter permease | |||
| 54 | M | M.BloN2ORF5635P (61% identity) | M.Bcr19EORF54P | |
| 55 | R | BpsD2ORF12200P (67% identity) | Bcr19EORF54P | |
| 56 | 48 aa hypothetical protein | |||
| 61 | 51 aa hypothetical protein | |||
| 62 | M | M.Blo10072IV (68% identity) | M.Bcr19EORF62P | |
| 63 | R | Blo10072IVP (87% identity) | Bcr19EORF62P | |
| 64 | DNA methyloase, restriction enzyme | |||
| 467 | MvaI/BcnI restriction endonuclease family | |||
| 468 | M | M.Bbi310ORF9045P (68% identity) | M.Bcr19EORF468P | |
| 469 | 143 aa hypothetical protein | |||
| 662 | 50S ribosomal protein L13 | |||
| 663 | M | M.Bca2020BORF1903P (93% identity) | M.Bcr19EORF663P | |
| 664 | R | Bca2020BORF1903P (92% identity) | Bcr19EORF663P | |
| 665 | 4-alpha-glucanotransferase | |||