Bifidobacterium catulorum MRM 8.19 |
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Putative Bifidobacterium catulorum MRM 8.19 RM systems
Ref: Modesto,M. et al. Int. J. Syst. Evol. Microbiol. 68 (2), 575-581 (2018)
REBASE ref # 30244
Contig set: 2,611,342 bp
GenBank #: QFFN00000000 (NZ_QFFN00000000)
REBASE acronym: Bca819
Org_num: 39832
All begin DF200_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 10240 | M | M.BmaUis1BORF47P (92% identity) | M.Bca819ORF10240P | |
| 10245 | S | S.MlaOR221ORF2576P (40% identity) | S.Bca819ORF10240P | |
| 10250 | 1374 aa hypothetical protein | |||
| 4985 | 418 aa hypothetical protein | |||
| 4990 | S | S2.PmeBin668ORFAP (23% identity) | S.Bca819ORF4995P | |
| 4995 | M | M.Bst23968ORF294P (79% identity) | M.Bca819ORF4995P | |
| 5000 | R | BspTRE1ORF1395P (88% identity) | Bca819ORF4995P | |
| 5005 | excinuclease ABC subunit A | |||
| 3125 | 368 aa hypothetical protein | |||
| 3130 | S | S.Bae26737ORFGP (46% identity) | S.Bca819ORF3130P | |
| 3135 | ISL3 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5870 | redox-regulated ATPase YchF | |||
| 5875 | M | M.Csc35704ORF3507P (17% identity) | M.Bca819ORF5875P | |
| 5880 | type III restriction endonuclease subunit M | |||
| 6540 | 342 aa hypothetical protein | |||
| 6545 | RM | Bst23968ORF15P (55% identity) | Bca819ORF6545P | |
| 4010 | 311 aa hypothetical protein | |||
| ??? | RM | BloT1ORF5075P (79% identity) | Bca819ORF4015P | |
| 405 | 148 aa hypothetical protein | |||
| 410 | RM | Bca1490ORFEP (82% identity) | Bca819ORF420P | |
| 415 | M | M2.Bbi23969ORFCP (92% identity) | M2.Bca819ORF420P | |
| 420 | M | M.BmaUis1BORF2099P (93% identity) | M1.Bca819ORF420P | |
| 425 | 138 aa hypothetical protein | |||
| 695 | 119 aa hypothetical protein | |||
| 700 | RM | Blo66ORFKP (51% identity) | Bca819ORF700P | |
| 710 | 3-dehydroquinate dehydratase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5320 | 337 aa hypothetical protein | |||
| 5325 | R | BloW11ORF515P (83% identity) | Bca819ORF5330P | |
| 5330 | M | M.BroRST9ORF2325P (53% identity) | M.Bca819ORF5330P | |
| 5335 | 258 aa hypothetical protein | |||
| 5875 | 543 aa hypothetical protein | |||
| 5880 | M | M.Bbi310ORF4575P (97% identity) | M.Bca819ORF5880P | |
| 5885 | R | Bbi310ORF4575P (96% identity) | Bca819ORF5880P | |
| 5890 | nucleotidyltransferase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4400 | (deoxy)nucleoside triphosphate | |||
| 4405 | R | BaeTRE17ORF3810P (60% identity) | Bca819ORF4405P | |
| 4410 | 668 aa hypothetical protein | |||
| 3380 | phosphonoacetaldehyde hydrolase | |||
| 3385 | R | BspTRI7McrCP (76% identity) | Bca819McrCP | |
| 3390 | R | BspTRI7McrBP (71% identity) | Bca819McrBP | |
| 3395 | uracil permease | |||