Bifidobacterium apri DSM 100238 |
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Putative Bifidobacterium apri DSM 100238 RM systems
Ref: Lugli,G.A. et al. unpublished
REBASE ref # 30247
Contig set: 2,421,262 bp
GenBank #: WBSO00000000 (NZ_WBSO00000000)
REBASE acronym: Bap100238
Org_num: 39841
All begin DSM100238_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 167 | 202 aa hypothetical protein | |||
| 168 | R | BpsNjM1ORFAP (54% identity) | Bap100238ORF169P | |
| 169 | M | M.Bsa2033BORF1189P (67% identity) | M.Bap100238ORF169P | |
| 170 | restriction endonuclease | |||
| 171 | S | S3.Bap100238ORF169P (50% identity) | S1.Bap100238ORF169P | |
| 172 | integrase | |||
| 173 | S | S1.BbiDII (35% identity) | S2.Bap100238ORF169P | |
| 174 | S | S1.Bap100238ORF169P (50% identity) | S3.Bap100238ORF169P | |
| 175 | S | S.BcoR11ORF15090P (34% identity) | S4.Bap100238ORF169P | |
| 176 | 102 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | M | M.Bbo22767ORFAP (50% identity) | M.Bap100238ORF1853P | |
| 1854 | R | Gsp1199SORF1955P (52% identity) | Bap100238ORF1853P | |
| 1855 | 48 aa hypothetical protein | |||
| 1359 | 70 aa hypothetical protein | |||
| 1360 | M | M1.OscSK9K4ORF8740P (75% identity) | M1.Bap100238ORF1360P | |
| 1361 | M | M2.OscSK9K4ORF8740P (66% identity) | M2.Bap100238ORF1360P | |
| 1362 | RM | AspW9116ORF2640P (77% identity) | Bap100238ORF1360P | |
| 1363 | ATP-dependent endonuclease | |||
| 1152 | 81 aa hypothetical protein | |||
| 1153 | RM | Bbo10736ORF170P (61% identity) | Bap100238ORF1153BP | |
| 1154 | RM | Bbo10736ORF170P (31% identity) | Bap100238ORF1153AP | |
| 1155 | ATP-dependent DNA helicase PcrA | |||
| 1156 | ATP-dependent endonuclease | |||
| 1157 | M | M.Bth15837ORFCP (62% identity) | M.Bap100238ORF1157P | |
| 1158 | R | Bth15837ORFCP (78% identity) | Bap100238ORF1157P | |
| 1159 | tpr repeat protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 169 | type I restriction-modification protein subunit | |||
| 170 | R | LhoC260MrrP (41% identity) | Bap100238MrrP | |
| 171 | Type I restriction-modification | |||
| 495 | DNA mismatch repair protein MutT | |||
| 496 | R | BthRBL67ORF1321P (92% identity) | Bap100238ORF496P | |
| 497 | TENA/THI-4 family protein | |||