Escherichia coli O157:H7 TB182A |
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Putative Escherichia coli O157:H7 TB182A RM systems
Ref: Bono,J.L. unpublished
REBASE ref # 30303
| Sequence length: | GenBank #: | |
| Chromosome: | 5,219,269 bp | CP038295 |
| plasmid pTB182A-4: | 66,022 bp | CP038298 |
| plasmid pTB182A-5: | 70,894 bp | CP038299 |
REBASE acronym: EcoTB182A
Org_num: 40047
All begin E3171_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 22470 | DUF262 domain-containing protein | |||
| 22475 | R | EcoDEC5DORF229P (100% identity) | CACNNNNNNNCTGG | EcoTB182AORF22480P |
| 22480 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.EcoTB182AORF22480P |
| 22485 | S | S.EcoS946ORF14840P (100% identity) | CACNNNNNNNCTGG | S.EcoTB182AORF22480P |
| 22490 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2335 | cell division protein DamX | |||
| 2340 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoTB182ADamP |
| 2345 | ribulose-phosphate 3-epimerase | |||
| 2860 | DUF2556 domain-containing protein | |||
| 2865 | M | M.EcoDEC5DORFAP (99% identity) | ATGCAT | M.EcoTB182AORF2865P |
| 2870 | DNA-binding transcriptional regulator Fis | |||
| 10105 | phosphohydrolase | |||
| 10110 | M | M.EcoDEC5DDcmP (100% identity) | CCWGG | M.EcoTB182ADcmP |
| 10115 | V | V.EcosPA8DcmP (100% identity) | V.EcoTB182ADcmP | |
| 10120 | drug/metabolite exporter YedA | |||
| 18895 | DUF1317 family protein | |||
| 18900 | M | M.EcoDEC5DORF948P (100% identity) | M.EcoTB182AORF18900P | |
| 18905 | cell division protein ZapA | |||
| 20670 | NinE family protein | |||
| 20675 | M | M.EcoDEC5DORF594P (100% identity) | GATC | M.EcoTB182AORF20675P |
| 20680 | recombination protein NinB | |||
| 22705 | RM | EcoDEC5DORF177P (100% identity) | GAAABCC | EcoTB182AORF22705P |
| 22710 | DEAD/DEAH box helicase | |||
| 22740 | N-acetylneuraminate epimerase | |||
| 22745 | R | EcoDEC5DORF22235P (100% identity) | EcoTB182AORF22745P | |
| 22750 | transposase | |||
| 22770 | 223 aa hypothetical protein | |||
| 22775 | S | S.EcoDEC5DORF161P (100% identity) | S.EcoTB182AORF22780P | |
| 22780 | M | M.EcoDEC5DORF161P (100% identity) | M.EcoTB182AORF22780P | |
| 22785 | 204 aa hypothetical protein | |||
| plasmid pTB182A-4 | ||||
| 25835 | 59 aa hypothetical protein | |||
| 25840 | M | M.EcoS946ORF415P (100% identity) | M.EcoTB182AORF25840P | |
| 25845 | 73 aa hypothetical protein | |||
| plasmid pTB182A-5 | ||||
| 26385 | 73 aa hypothetical protein | |||
| 26390 | M | M.SflP099ORF24775P (100% identity) | M.EcoTB182AORF26390P | |
| 26395 | 101 aa hypothetical protein | |||