Diaphorobacter species JS3050 |
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Putative Diaphorobacter species JS3050 RM systems
Ref: Gao,Y.-Z. et al. unpublished
REBASE ref # 30413
Complete sequence: 3,983,118 bp
GenBank #: CP053553
REBASE acronym: Dsp3050
Org_num: 40332
All begin HND92_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 7000 | 100 aa hypothetical protein | |||
| 7005 | R | AspJSORF2616P (99% identity) | Dsp3050ORF7015P | |
| 7010 | 185 aa hypothetical protein | |||
| 7015 | M | M.DspMNS0ORF7225P (99% identity) | M.Dsp3050ORF7015P | |
| 7020 | nucleotidyltransferase domain-containing | |||
| 7025 | 152 aa hypothetical protein | |||
| 7030 | S | S.DspMNS0ORF7225P (99% identity) | S.Dsp3050ORF7015P | |
| 7035 | 47 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1095 | response regulator transcription factor | |||
| 1100 | M | Dsp3051ORF12035P (100% identity) | M.Dsp3050ORF1100P | |
| 1105 | DNA damage-inducible protein D | |||
| 1105 | DNA damage-inducible protein D | |||
| 1110 | M | M.Psp59ORF2150P (67% identity) | M.Dsp3050ORF1110P | |
| 1120 | AmpG family muropeptide MFS transporter | |||
| 2190 | 185 aa hypothetical protein | |||
| 2195 | M | M.TarK172ORF732P (83% identity) | M.Dsp3050ORF2195P | |
| 2200 | DNA topoisomerase III | |||
| 3355 | 181 aa hypothetical protein | |||
| 3360 | M | M1.Doe16959ORF42P (91% identity) | M1.Dsp3050ORF3360P | |
| 3365 | M | M2.Doe16959ORF3969P (87% identity) | M2.Dsp3050ORF3360P | |
| 3370 | 78 aa hypothetical protein | |||
| 3790 | 186 aa hypothetical protein | |||
| 3795 | M | M1.Doe16959ORF42P (95% identity) | M1.Dsp3050ORF3795P | |
| 3800 | M | M2.Dsp3050ORF3360P (87% identity) | M2.Dsp3050ORF3795P | |
| 3805 | 78 aa hypothetical protein | |||
| 4055 | 70 aa hypothetical protein | |||
| 4060 | M | M.DspMNS0ORF3060P (100% identity) | M.Dsp3050ORF4060P | |
| 4065 | RES family NAD+ phosphorylase | |||
| 10105 | 172 aa hypothetical protein | |||
| ??? | RM | PciC12ORF6405P (53% identity) | Dsp3050ORF10110P | |
| 10120 | N-6 DNA methylase | |||
| 10195 | helix-turn-helix domain-containing protein | |||
| 10200 | M | M.Pae12305ORF25045P (94% identity) | M.Dsp3050ORF10200P | |
| 10205 | V | V.SstDN36ORF5585P (92% identity) | V.Dsp3050ORF10200P | |
| 10210 | ATP-binding protein | |||
| 11835 | AAA family ATPase | |||
| 11840 | RM | AspB1ORF5065P (42% identity) | Dsp3050ORF11840BP | |
| 11845 | IS110-like element ISAisp4 family transposase | |||
| 11850 | RM | AspNO1ORF21009P (21% identity) | Dsp3050ORF11840AP | |
| 11855 | type II toxin-antitoxin system RelE/ParE family | |||
| 12275 | tyrosine-type recombinase/integrase | |||
| 12280 | M | M.BmuN167ORF1925P (67% identity) | M.Dsp3050ORF12280P | |
| 12285 | restriction endonuclease | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7830 | helix-turn-helix domain-containing protein | |||
| 7835 | M | M.Tsp34681ORFEP (89% identity) | M.Dsp3050ORF7835P | |
| 7840 | R | HspPBCORF6575P (97% identity) | Dsp3050ORF7835P | |
| 7845 | DUF262 domain-containing protein | |||
| 16095 | integrase | |||
| 16100 | R | BbrRORF912P (94% identity) | Dsp3050ORF16105P | |
| 16105 | M | M.DspD69ORF4840P (45% identity) | M.Dsp3050ORF16105P | |
| 16110 | S8 family peptidase | |||
| 18555 | riboflavin synthase | |||
| 18560 | R | DspMNS0ORF18205P (100% identity) | Dsp3050ORF18575P | |
| 18565 | DUF4276 family protein | |||
| 18570 | AAA family ATPase | |||
| 18575 | M | M.DspMNS0ORF18205P (98% identity) | M.Dsp3050ORF18575P | |
| 18580 | sensor histidine kinase | |||
| 18640 | polyamine aminopropyltransferase | |||
| 18645 | R | Dsp3051ORF13610P (99% identity) | Dsp3050ORF18655P | |
| 18650 | transcriptional regulator | |||
| 18655 | M | M.KstORFEP (47% identity) | M.Dsp3050ORF18655P | |
| 18660 | DUF350 domain-containing protein | |||