Fusobacterium nucleatum Fn12230 |
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Putative Fusobacterium nucleatum Fn12230 RM systems
Ref: Huang,Y. and Han,Y. unpublished
REBASE ref # 30393
Complete sequence: 2,421,837 bp
GenBank #: CP053468
REBASE acronym: Fnu12230
Org_num: 40300
All begin HOO60_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 8280 | winged helix-turn-helix transcriptional | |||
| 8285 | R | FnuA29IIP (99% identity) | Fnu12230ORF8310P | |
| 8290 | tyrosine-type recombinase/integrase | |||
| 8295 | S | S3.Fpo43A3ORF6085P (100% identity) | S3.Fnu12230ORF8310P | |
| 8300 | S | S2.Fpo43A3ORF6085P (100% identity) | S2.Fnu12230ORF8310P | |
| 8305 | S | S1.Fpo43A3ORF6085P (100% identity) | S1.Fnu12230ORF8310P | |
| 8310 | M | M.FnuF319ORF6890P (98% identity) | M.Fnu12230ORF8310P | |
| 8315 | metal ABC transporter permease | |||
| 10270 | flotillin family protein | |||
| 10275 | R | FnuA29IIIP (99% identity) | Fnu12230ORF10295P | |
| 10280 | S | S2.Fnu3774ORF2490P (95% identity) | S2.Fnu12230ORF10295P | |
| 10285 | S | S.FnuA29III (66% identity) | S1.Fnu12230ORF10295P | |
| 10290 | ATP-dependent DNA helicase RecG | |||
| 10295 | M | M.Fpo149AORF9350P (100% identity) | M.Fnu12230ORF10295P | |
| 10300 | 116 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5210 | 362 aa hypothetical protein | |||
| 5215 | M | M.FnuSB008ORF6130P (100% identity) | M.Fnu12230ORF5215P | |
| 5220 | 223 aa hypothetical protein | |||
| 9865 | SWIM zinc finger family protein | |||
| 9870 | M | M2.Fpo149AORF10095P (100% identity) | M1.Fnu12230ORF9870P | |
| 9875 | R | Fpo149AORF10095P (100% identity) | Fnu12230ORF9870P | |
| 9880 | M | M1.Fpo149AORF10095P (99% identity) | M2.Fnu12230ORF9870P | |
| 9885 | type II toxin-antitoxin system RelE/ParE family | |||
| 10955 | biotin--[acetyl-CoA-carboxylase] ligase | |||
| 10960 | M | M.Fpo43A3ORF9130P (95% identity) | GCATC | M.Fnu12230ORF10960P |
| 10965 | ArsB/NhaD family transporter | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7850 | homoserine dehydrogenase | |||
| 7855 | R | Fpo40A2ORF11760P (100% identity) | Fnu12230ORF7860P | |
| 7860 | M | M.Fnu1278ORF4250P (100% identity) | M.Fnu12230ORF7860P | |
| 7865 | IS200/IS605 family element transposase accessory | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 11255 | RidA family protein | |||
| 11260 | R | FnuCTI6ORF2206P (98% identity) | Fnu12230ORF11260P | |
| 11265 | DEAD/DEAH box helicase | |||