Spiroplasma citri C5 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Spiroplasma citri C5 RM systems
Ref: Rattner,R. et al. unpublished
REBASE ref # 30709
Complete sequence: 1,618,536 bp
GenBank #: CP053304
REBASE acronym: SciC5
Org_num: 41251
All begin HHA36_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 305 | type IV secretory system conjugative DNA | |||
| 310 | R | SciMBORF405P (99% identity) | SciC5ORF315P | |
| 315 | M | M.SciR8ORF89P (82% identity) | M.SciC5ORF315P | |
| 320 | 89 aa hypothetical protein | |||
| 330 | 225 aa hypothetical protein | |||
| 335 | S | S.SciMBORF530P (34% identity) | S1.SciC5ORF345P | |
| 340 | S | S.SciC5ORF2015P (55% identity) | S2.SciC5ORF345P | |
| 345 | M | M.SciMBORF530P (98% identity) | M.SciC5ORF345P | |
| ??? | R | SciC5ORF420P (99% identity) | SciC5ORF345P | |
| 365 | 81 aa hypothetical protein | |||
| 410 | type IV secretory system conjugative DNA | |||
| ??? | R | SciMBORF530P (98% identity) | SciC5ORF420P | |
| 420 | M | M.SciMBORF530P (98% identity) | M.SciC5ORF420P | |
| 425 | S | S.SciR8ORF89P (100% identity) | S.SciC5ORF420P | |
| 430 | 204 aa hypothetical protein | |||
| 2000 | 75 aa hypothetical protein | |||
| ??? | R | SkuCR2ORF1066P (96% identity) | SciC5ORF2015P | |
| 2015 | M | M.SkuCR2ORF895P (98% identity) | M.SciC5ORF2015P | |
| 2020 | S | S2.SciC5ORF345P (55% identity) | S.SciC5ORF2015P | |
| 2025 | IS5 family transposase | |||
| 4265 | 50 aa hypothetical protein | |||
| 4270 | S | S.SciR8ORF908P (99% identity) | S.SciC5ORF4275P | |
| 4275 | M | M.SciR8ORF908P (100% identity) | M.SciC5ORF4275P | |
| 4280 | 153 aa hypothetical protein | |||
| 5825 | 81 aa hypothetical protein | |||
| 5830 | R | SciMBORF530P (99% identity) | SciC5ORF5835P | |
| 5835 | M | M.SciMBORF530P (100% identity) | M.SciC5ORF5835P | |
| 5840 | S | S.SciMBORF530P (100% identity) | S.SciC5ORF5835P | |
| 5845 | 462 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1895 | 177 aa hypothetical protein | |||
| 1900 | M | M.SphP40ORF1550P (83% identity) | M.SciC5ORF1900P | |
| 1905 | 47 aa hypothetical protein | |||
| 1970 | 337 aa hypothetical protein | |||
| 1975 | M | M.SciC5ORF5310P (98% identity) | M.SciC5ORF1975P | |
| 1980 | 102 aa hypothetical protein | |||
| 3095 | 63 aa hypothetical protein | |||
| ??? | M | M.SciR8ORF613P (100% identity) | M.SciC5ORF3100P | |
| 3110 | 177 aa hypothetical protein | |||
| 3850 | 202 aa hypothetical protein | |||
| 3855 | M | M.SciCC2ORF3885P (50% identity) | M.SciC5ORF3855P | |
| 3860 | 78 aa hypothetical protein | |||
| 5255 | 55 aa hypothetical protein | |||
| 5260 | M | M.SciMBORF11535P (100% identity) | M.SciC5ORF5260P | |
| 5265 | 62 aa hypothetical protein | |||
| 5305 | DUF87 domain-containing protein | |||
| 5310 | M | M.SciC5ORF1975P (98% identity) | M.SciC5ORF5310P | |
| 5315 | 102 aa hypothetical protein | |||
| 5330 | type IV secretory system conjugative DNA | |||
| 5335 | M | M.SciMBORF11605P (100% identity) | M.SciC5ORF5335P | |
| ??? | type II restriction endonuclease | |||
| 5335 | DNA (cytosine-5-)-methyltransferase | |||
| ??? | R | SciMBORF11140P (99% identity) | SciC5ORF5340P | |
| 5345 | 460 aa hypothetical protein | |||
| 5590 | 90 aa hypothetical protein | |||
| 5595 | M | M.SciMBORF450P (100% identity) | M.SciC5ORF5595P | |
| 5600 | 63 aa hypothetical protein | |||
| 5795 | DUF87 domain-containing protein | |||
| 5800 | M | M.SciC5ORF1975P (97% identity) | M.SciC5ORF5800P | |
| 5805 | 149 aa hypothetical protein | |||
| 5915 | IS30 family transposase | |||
| 5920 | M | M.SciBR12ORF6345P (100% identity) | M.SciC5ORF5920P | |
| 5925 | 96 aa hypothetical protein | |||
| 6285 | 59 aa hypothetical protein | |||
| 6290 | RM | SciR8ORF1224P (99% identity) | SciC5ORF6290P | |
| 6295 | 68 aa hypothetical protein | |||