Escherichia coli GF4-3 |
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Putative Escherichia coli GF4-3 RM systems
Ref: Foster-Nyarko,E. et al. unpublished
REBASE ref # 30382
Complete sequence: 4,821,968 bp
GenBank #: CP053258
REBASE acronym: EcoGF43
Org_num: 40272
All begin HLY11_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 10855 | DUF262 domain-containing protein | |||
| 10860 | M | M.EcoRG065ORF11505P (98% identity) | M.EcoGF43ORF10860P | |
| 10865 | S | S.Eco0187ORF19040P (59% identity) | S.EcoGF43ORF10860P | |
| 10870 | R | EcoA20ORF21885P (98% identity) | EcoGF43ORF10860P | |
| 10875 | 237 aa hypothetical protein | |||
| 11125 | WYL domain-containing protein | |||
| 11130 | R | Eco266ORF19540P (99% identity) | EcoGF43ORF11135P | |
| 11135 | M | M.Eco475ORF5625P (99% identity) | M.EcoGF43ORF11135P | |
| 11140 | S | S.Eco475ORF5625P (99% identity) | S.EcoGF43ORF11135P | |
| 11145 | AAA family ATPase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 870 | phosphohydrolase | |||
| 875 | M | M.SdySWHE2DcmP (99% identity) | CCWGG | M.EcoGF43DcmP |
| 880 | V | V.EcoPS103DcmP (100% identity) | V.EcoGF43DcmP | |
| 885 | drug/metabolite exporter YedA | |||
| 6425 | replication endonuclease | |||
| 6430 | M | M.Ssp8103ORF5415P (98% identity) | GATC | M.EcoGF43ORF6430P |
| 6435 | TraR/DksA family transcriptional regulator | |||
| 11010 | RM | EcoPSJ12ORF44410P (96% identity) | EcoGF43ORF11010P | |
| 11015 | DEAD/DEAH box helicase | |||
| 15930 | cell division protein DamX | |||
| 15935 | M | M.SspPIBDamP (99% identity) | GATC | M.EcoGF43DamP |
| 15940 | ribulose-phosphate 3-epimerase | |||
| 16555 | DUF2556 family protein | |||
| 16560 | M | M.Ecou015ORF2460P (100% identity) | ATGCAT | M.EcoGF43ORF16560P |
| 16565 | DNA-binding transcriptional regulator Fis | |||