Putative Aeromonas media R50-22 RM systems
Ref: Shi,Y. et al. unpublished
REBASE ref # 30278
Sequence length: | GenBank #: | |
Chromosome: | 4,748,464 bp | CP038448 |
plasmid pAeme5: | 198,927 bp | CP038449 |
plasmid pAeme6: | 199,818 bp | CP038450 |
REBASE acronym: AmeR5022
Org_num: 39942
All begin E4188_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
3545 | ISL3 family transposase | |||
3550 | R | AcaWP5ORF25180P (100% identity) | GACNNNNNNCGT | AmeR5022ORF21625P |
3555 | S | S.AcaWP5ORF25180P (100% identity) | GACNNNNNNCGT | S.AmeR5022ORF21625P |
3560 | M | M.AcaWP5ORF25180P (100% identity) | GACNNNNNNCGT | M.AmeR5022ORF21625P |
3565 | tRNA dihydrouridine synthase DusB | |||
6730 | 99 aa hypothetical protein | |||
6735 | M | M.AmeT51ORF18045P (100% identity) | M.AmeR5022ORF6735P | |
6740 | S | S1.AmeR253ORF20565P (100% identity) | S1.AmeR5022ORF6735P | |
6745 | ISAs1 family transposase | |||
6750 | S | S2.AmeR253ORF20565P (100% identity) | S2.AmeR5022ORF6735P | |
6755 | DUF1643 domain-containing protein | |||
6760 | R | AmeT51ORF18045P (100% identity) | AmeR5022ORF6735P | |
6765 | transcription elongation factor GreB | |||
plasmid pAeme5 | ||||
22710 | 64 aa hypothetical protein | |||
22715 | M | M.AcaWP5ORF25180P (100% identity) | GACNNNNNNCGT | M.AmeR5022ORF21625P |
22720 | S | S.AcaWP5ORF25180P (100% identity) | GACNNNNNNCGT | S.AmeR5022ORF21625P |
22725 | R | AcaWP5ORF25180P (100% identity) | GACNNNNNNCGT | AmeR5022ORF21625P |
22730 | ISL3 family transposase | |||
plasmid pAeme6 | ||||
23100 | ISL3-like element ISSm4 family transposase | |||
23105 | R | AcaR252ORF23060P (100% identity) | AmeR5022ORF23120P | |
23110 | restriction endonuclease subunit S | |||
23115 | DUF1016 domain-containing protein | |||
23120 | M | M.SmaY426ORF10P (100% identity) | M.AmeR5022ORF23120P | |
23125 | 183 aa hypothetical protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
1800 | ribulose-phosphate 3-epimerase | |||
1805 | M | M.AmeT58DamP (100% identity) | GATC | M.AmeR5022DamP |
1810 | cell division protein DamX | |||
15480 | histidine phosphatase family protein | |||
15485 | V | V.AmeR253ORF7335P (100% identity) | V.AmeR5022ORF15490P | |
15490 | M | M.AmeR253ORF7335P (100% identity) | M.AmeR5022ORF15490P | |
15495 | ATP-binding protein | |||
17005 | 138 aa hypothetical protein | |||
17010 | M | M1.AmeR253ORF8855P (100% identity) | M1.AmeR5022ORF17010P | |
17015 | M | M2.AmeR253ORF8855P (100% identity) | M2.AmeR5022ORF17010P | |
17020 | DUF4406 domain-containing protein | |||
plasmid pAeme5 | ||||
22300 | 176 aa hypothetical protein | |||
22305 | M | M.AmeR253ORF22155P (100% identity) | M.AmeR5022ORF22305P | |
22310 | 72 aa hypothetical protein | |||
22855 | 1398 aa hypothetical protein | |||
22860 | M | M.AmeR253ORF22480P (100% identity) | M.AmeR5022ORF22860P | |
22865 | 99 aa hypothetical protein |