Vibrio cholerae O1 biovar El Tor P27459 |
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Putative Vibrio cholerae O1 biovar El Tor P27459 RM systems
Ref: Blokesch,M. unpublished
REBASE ref # 30769
| Sequence length: | GenBank #: | |
| chromosome 1: | 2,962,956 bp | CP047299 |
| chromosome 2: | 1,073,557 bp | CP047300 |
REBASE acronym: Vch27459
Org_num: 41395
All begin GTF71_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 5420 | 687 aa hypothetical protein | |||
| 5425 | M | M.VspNIH41ORF1746P (100% identity) | AAGNNNNNNCATC | M.Vch27459ORF5425P |
| 5430 | S | S.VspNIH41ORF1746P (99% identity) | AAGNNNNNNCATC | S.Vch27459ORF5425P |
| 5435 | DUF262 domain-containing protein | |||
| 5440 | DUF262 domain-containing protein | |||
| 5445 | R | VspNIH41ORF1746P (100% identity) | AAGNNNNNNCATC | Vch27459ORF5425P |
| 5450 | anti-phage defense ZorAB system ZorA | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 1300 | AAA family ATPase | |||
| 1305 | M | M.VspNIH41DamP (100% identity) | GATC | M.Vch27459DamP |
| 1310 | ribulose-phosphate 3-epimerase | |||
| chromosome 2 | ||||
| 14320 | GMP reductase | |||
| 14325 | M | M.VspNIH41ORF700P (100% identity) | RCCGGY | M.Vch27459ORF14325P |
| 14330 | R | VchsMO10ORF14720P (100% identity) | RCCGGY | Vch27459ORF14325P |
| 14335 | DUF3696 domain-containing protein | |||
| 15600 | type II toxin-antitoxin system Phd/YefM family | |||
| 15605 | M | M.VspNIH41ORF3529P (94% identity) | M.Vch27459ORF15605P | |
| 15610 | 141 aa hypothetical protein | |||