Vibrio cholerae O1 biovar El Tor DRC-193A |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Vibrio cholerae O1 biovar El Tor DRC-193A RM systems
Ref: Blokesch,M. unpublished
REBASE ref # 30769
| Sequence length: | GenBank #: | |
| chromosome 1: | 3,058,772 bp | CP047301 |
| chromosome 2: | 1,045,383 bp | CP047302 |
REBASE acronym: Vch193A
Org_num: 41393
All begin GTF75_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 5445 | 687 aa hypothetical protein | |||
| 5450 | M | M.VspNIH41ORF1746P (100% identity) | M.Vch193AORF5450P | |
| 5455 | S | S.VspNIH41ORF1746P (84% identity) | S.Vch193AORF5450P | |
| 5460 | IS256 family transposase | |||
| 5465 | restriction endonuclease subunit S | |||
| 5470 | DUF262 domain-containing protein | |||
| 5475 | DUF262 domain-containing protein | |||
| 5480 | R | VspNIH41ORF1746P (100% identity) | Vch193AORF5450P | |
| 5485 | anti-phage defense ZorAB system ZorA | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 1315 | AAA family ATPase | |||
| 1320 | M | M.VspNIH41DamP (100% identity) | GATC | M.Vch193ADamP |
| 1325 | ribulose-phosphate 3-epimerase | |||
| 10980 | PglZ domain-containing protein | |||
| 10985 | RM | VchPC1ORF10795P (100% identity) | RTAAAYG | Vch193AORF10985P |
| 10990 | BREX system P-loop protein BrxC | |||
| chromosome 2 | ||||
| 14785 | GMP reductase | |||
| 14790 | M | M.VspNIH41ORF700P (100% identity) | RCCGGY | M.Vch193AORF14790P |
| 14795 | R | VchsMO10ORF14720P (100% identity) | RCCGGY | Vch193AORF14790P |
| 14800 | DUF3696 domain-containing protein | |||
| 15835 | type II toxin-antitoxin system Phd/YefM family | |||
| 15840 | M | M.VspNIH41ORF3529P (94% identity) | M.Vch193AORF15840P | |
| 15845 | 141 aa hypothetical protein | |||