Vibrio cholerae O1 biovar El Tor E7946 |
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Putative Vibrio cholerae O1 biovar El Tor E7946 RM systems
Ref: Blokesch,M. unpublished
REBASE ref # 30769
| Sequence length: | GenBank #: | |
| chromosome 1: | 3,011,453 bp | CP047303 |
| chromosome 2: | 1,071,008 bp | CP047304 |
REBASE acronym: Vch7946
Org_num: 41394
All begin GTF74_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 5675 | 687 aa hypothetical protein | |||
| 5680 | M | M.VspNIH41ORF1746P (100% identity) | AAGNNNNNNCATC | M.Vch7946ORF5680P |
| 5685 | S | S.VspNIH41ORF1746P (99% identity) | AAGNNNNNNCATC | S.Vch7946ORF5680P |
| 5690 | DUF262 domain-containing protein | |||
| 5695 | DUF262 domain-containing protein | |||
| 5700 | R | VspNIH41ORF1746P (100% identity) | AAGNNNNNNCATC | Vch7946ORF5680P |
| 5705 | anti-phage defense ZorAB system ZorA | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 1335 | AAA family ATPase | |||
| 1340 | M | M.VspNIH41DamP (100% identity) | GATC | M.Vch7946DamP |
| 1345 | ribulose-phosphate 3-epimerase | |||
| chromosome 2 | ||||
| 14640 | GMP reductase | |||
| 14645 | M | M.VspNIH41ORF700P (100% identity) | RCCGGY | M.Vch7946ORF14645P |
| 14650 | R | VchsMO10ORF14720P (100% identity) | RCCGGY | Vch7946ORF14645P |
| 14655 | DUF3696 domain-containing protein | |||
| 15905 | type II toxin-antitoxin system Phd/YefM family | |||
| 15910 | M | M.VspNIH41ORF3529P (94% identity) | M.Vch7946ORF15910P | |
| 15915 | 141 aa hypothetical protein | |||