Alteromonas pelagimontana 5.12 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Alteromonas pelagimontana 5.12 RM systems
Ref: Sinha,R.K. et al. unpublished
REBASE ref # 30282
Complete sequence: 4,314,189 bp
GenBank #: CP052766
REBASE acronym: Ape512
Org_num: 39955
All begin CA267_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 9085 | 185 aa hypothetical protein | |||
| 9090 | S | S.Isp513ORFEP (100% identity) | S.Ape512ORF9095P | |
| 9095 | M | M.Isp513ORFEP (100% identity) | M.Ape512ORF9095P | |
| 9100 | R | Isp513ORFEP (100% identity) | Ape512ORF9095P | |
| 9105 | helix-turn-helix transcriptional regulator | |||
| 10350 | NAD(P)/FAD-dependent oxidoreductase | |||
| 10355 | R | Isp513ORFGP (83% identity) | Ape512ORF10365P | |
| 10360 | S | S.Isp513ORFGP (100% identity) | S.Ape512ORF10365P | |
| 10365 | M | M.Isp513ORFGP (100% identity) | M.Ape512ORF10365P | |
| 10370 | restriction endonuclease | |||
| 16120 | 113 aa hypothetical protein | |||
| 16125 | R | Isp513ORFAP (99% identity) | Ape512ORF16130P | |
| 16130 | M | M.Isp513ORFAP (100% identity) | M.Ape512ORF16130P | |
| 16135 | S | S.Isp513ORFAP (100% identity) | S.Ape512ORF16130P | |
| 16140 | 565 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1545 | BREX system P-loop protein BrxC | |||
| 1550 | RM | Isp513ORFBAP (100% identity) | Ape512ORF1550AP | |
| 1555 | RM | Isp513ORFBBP (98% identity) | Ape512ORF1550BP | |
| 1560 | PglZ domain-containing protein | |||
| 1855 | 58 aa hypothetical protein | |||
| 1860 | M | M.Isp513ORFCP (100% identity) | M.Ape512ORF1860P | |
| 1865 | 94 aa hypothetical protein | |||
| 9855 | LlaJI family restriction endonuclease | |||
| 9860 | R | Isp513ORFFP (100% identity) | Ape512ORF9865P | |
| 9865 | M | M.Isp513ORFFP (100% identity) | M.Ape512ORF9865P | |
| 9870 | 325 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10365 | type I restriction-modification system subunit | |||
| 10370 | R | Isp513MrrP (97% identity) | Ape512MrrP | |
| 10375 | 274 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7105 | 129 aa hypothetical protein | |||
| ??? | M | M.Isp513ORFDP (99% identity) | M.Ape512ORF7110P | |
| 7115 | DUF2970 domain-containing protein | |||