Bacteroides dorei JR02 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Bacteroides dorei JR02 RM systems
Ref: Russell,J.T. unpublished
REBASE ref # 29777
Complete sequence: 5,515,594 bp
GenBank #: CP046425
REBASE acronym: BdoJR02
Org_num: 39851
All begin GN306_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1395 | recombinase | |||
| 1400 | C | C.Msa17ORFG1P (100% identity) | C.BdoJR02ORF1405P | |
| 1405 | M | M1.Bth576ORF2630P (100% identity) | M1.BdoJR02ORF1405P | |
| 1410 | M | M2.Bth576ORF2630P (100% identity) | M2.BdoJR02ORF1405P | |
| 1415 | S | S1.Bth576ORF2630P (87% identity) | S1.BdoJR02ORF1405P | |
| 1420 | DNA damage-inducible protein D | |||
| 1425 | tyrosine-type recombinase/integrase | |||
| 1430 | S | S2.BdoJR01ORF21160P (100% identity) | S3.BdoJR02ORF1405P | |
| 1435 | R | Bfr4ORF2110P (100% identity) | BdoJR02ORF1405P | |
| 1440 | 504 aa hypothetical protein | |||
| 16405 | cell surface protein | |||
| 16410 | S | S4.Pvu3C24ORF1046P (100% identity) | S3.BdoJR02IIP | |
| 16415 | restriction endonuclease subunit S | |||
| 16420 | tyrosine-type recombinase/integrase | |||
| 16425 | S | S2.Pdo3C03ORF2038P (89% identity) | CAAGNNNNNNNTRRG | S2.BdoJR02II |
| 16430 | DUF1016 family protein | |||
| 16435 | tyrosine-type recombinase/integrase | |||
| 16440 | tyrosine-type recombinase/integrase | |||
| 16445 | tyrosine-type recombinase/integrase | |||
| 16455 | S | S1.BdoJR03IP (100% identity) | S1.BdoJR02IIP | |
| 16460 | M | M.Pdo3716YORF13100P (100% identity) | CAAGNNNNNNNTRRG | M.BdoJR02II |
| 16465 | R | Pdo1046IIIP (100% identity) | CAAGNNNNNNNTRRG | BdoJR02IIP |
| 16470 | C | C.Pvu201ORF22395P (100% identity) | C.BdoJR02IIP | |
| 16475 | DUF4357 domain-containing protein | |||
| 18340 | S-adenosylmethionine:tRNA | |||
| 18345 | M | M.PmeBin22ORFCP (100% identity) | CAAYNNNNNNGTTY | M.BdoJR02I |
| 18350 | S | S1.Pdo3716YORF6360P (100% identity) | RAACNNNNNNRTTG | S1.BdoJR02I |
| 18355 | S | S2.Pdo1046IP (75% identity) | S2.BdoJR02IP | |
| 18360 | tyrosine-type recombinase/integrase | |||
| 18365 | tyrosine-type recombinase/integrase | |||
| 18370 | tyrosine-type recombinase/integrase | |||
| 18375 | DUF1016 family protein | |||
| 18380 | R | Pdo17855ORF1705P (100% identity) | RAACNNNNNNRTTG | BdoJR02IP |
| 18385 | WYL domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6340 | 511 aa hypothetical protein | |||
| 6345 | M | M.BdoJR03ORF6340P (100% identity) | M.BdoJR02ORF6345P | |
| 6350 | DUF4143 domain-containing protein | |||
| 6455 | DNA primase | |||
| ??? | M | M.PmeBin28ORFCP (100% identity) | M.BdoJR02ORF6460P | |
| 6470 | TraM recognition domain-containing protein | |||
| 6855 | toxin Bro | |||
| 6865 | M | M.PmeBin28ORFBP (100% identity) | M.BdoJR02ORF6865P | |
| 6870 | 115 aa hypothetical protein | |||
| 13285 | conjugative transposon protein TraN | |||
| 13290 | M | M.Bth119ORF13585P (100% identity) | M.BdoJR02ORF13290P | |
| 13295 | 117 aa hypothetical protein | |||
| 13320 | DUF5045 domain-containing protein | |||
| 13325 | M | M.Bth266ORF14520P (100% identity) | M.BdoJR02ORF13325P | |
| 13330 | 240 aa hypothetical protein | |||
| 14300 | conjugal transfer protein TraO | |||
| 14305 | M | M.Pdo1046ORF15070P (100% identity) | M.BdoJR02ORF14305P | |
| 14310 | DUF3872 domain-containing protein | |||
| 15625 | alpha-amylase | |||
| 15630 | R | Pdo3C03ORF1868P (100% identity) | BdoJR02ORF15630P | |
| 15635 | 71 aa hypothetical protein | |||