Bacteroides dorei JR05 |
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Putative Bacteroides dorei JR05 RM systems
Ref: Russell,J.T. unpublished
REBASE ref # 29777
Complete sequence: 5,571,237 bp
GenBank #: CP046428
REBASE acronym: BdoJR05
Org_num: 39854
All begin GN309_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 585 | helix-turn-helix domain-containing protein | |||
| 590 | HsdR family type I site-specific | |||
| 585 | helix-turn-helix domain-containing protein | |||
| 590 | R | Bsp3716PORF21890P (100% identity) | CAGNNNNNTGT | BdoJR05IIIP |
| ??? | M | M.BdoJR04I (100% identity) | CAGNNNNNTGT | M.BdoJR05III |
| 600 | DUF1016 family protein | |||
| 605 | 99 aa hypothetical protein | |||
| 610 | S | S2.Bov299ORF4215P (100% identity) | S2.BdoJR05IIIP | |
| 615 | S | S3.BdoJR04I (100% identity) | CAGNNNNNTGT | S3.BdoJR05III |
| 620 | tyrosine-type recombinase/integrase | |||
| 625 | S | S3.Bsp3716PORF21890P (54% identity) | S4.BdoJR05IIIP | |
| 630 | 182 aa hypothetical protein | |||
| 3675 | WYL domain-containing protein | |||
| 3680 | R | Pdo17855ORF1705P (100% identity) | CAAYNNNNNNCTG | BdoJR05IIP |
| 3685 | S | S2.PmeBin22ORFCP (100% identity) | S2.BdoJR05IIP | |
| 3690 | S | S1.Pdo1051II (100% identity) | CAAYNNNNNNCTG | S1.BdoJR05II |
| 3695 | M | M.PmeBin22ORFCP (100% identity) | CAAYNNNNNNCTG | M.BdoJR05II |
| 3700 | S-adenosylmethionine:tRNA | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 580 | 317 aa hypothetical protein | |||
| 585 | C | C.Bsp3716PORF21890P (100% identity) | C.BdoJR05ORF585P | |
| 590 | HsdR family type I site-specific | |||
| 6775 | phosphoadenosine phosphosulfate reductase family | |||
| 6780 | M | M.BdoJR04ORF16385P (100% identity) | M.BdoJR05ORF6780P | |
| 6785 | 335 aa hypothetical protein | |||
| 6790 | 190 aa hypothetical protein | |||
| 6795 | M | M.BdoJR04ORF16370P (100% identity) | M.BdoJR05ORF6795P | |
| 6800 | 204 aa hypothetical protein | |||
| 7005 | 71 aa hypothetical protein | |||
| 7010 | R | Pdo1051ORF14185P (100% identity) | BdoJR05ORF7010P | |
| 7015 | alpha-amylase | |||
| 7595 | thymidylate synthase | |||
| 7600 | M | M.Uph2207ORFAP (100% identity) | M.BdoJR05ORF7600P | |
| 7605 | ornithine cyclodeaminase | |||
| 8175 | 60 aa hypothetical protein | |||
| 8180 | M | M.Pdo1051ORF13020P (100% identity) | M.BdoJR05ORF8180P | |
| 8185 | ATP-binding protein | |||
| 12270 | DUF4373 domain-containing protein | |||
| 12275 | M | M.BdoJR04ORF10890P (100% identity) | M.BdoJR05ORF12275P | |
| 12280 | 65 aa hypothetical protein | |||
| 13930 | peptidoglycan DD-metalloendopeptidase family | |||
| 13935 | M | M.Pdo1047IV (100% identity) | M.BdoJR05ORF13935P | |
| 13940 | radical SAM protein | |||
| 17520 | AAA family ATPase | |||
| 17525 | R | R2.Pdo1051ORF4310P (100% identity) | R1.BdoJR05ORF17535P | |
| 17530 | C | C.Pdo1051ORF4310P (100% identity) | C.BdoJR05ORF17535P | |
| 17535 | M | M2.Pdo1051ORF4310P (100% identity) | M1.BdoJR05ORF17535P | |
| 17540 | M | M1.Pdo1051ORF4310P (100% identity) | M2.BdoJR05ORF17535P | |
| 17545 | R | R1.Pdo1051ORF4310P (100% identity) | R2.BdoJR05ORF17535P | |
| 17550 | V | V.Pdo1051ORF4310P (100% identity) | V.BdoJR05ORF17535P | |
| 17555 | DNA-binding protein | |||
| 21065 | 320 aa hypothetical protein | |||
| 21070 | M | M.Pdo1051ORF20555P (100% identity) | M.BdoJR05ORF21070P | |
| 21075 | recombinase family protein | |||
| 21450 | 156 aa hypothetical protein | |||
| ??? | M | M.Bfr18BORF3050P (100% identity) | M.BdoJR05ORF21455P | |
| 21465 | DUF3846 domain-containing protein | |||