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Putative Xylella fastidiosa subsp. multiplex RH1 RM systems
Ref: Krugner,R. unpublished
REBASE ref # 30695
Complete sequence: 2,678,425 bp
GenBank #: CP052853
REBASE acronym: XfaRH1
Org_num: 41190
All begin HKJ33_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
1480 | M48 family metallopeptidase | |||
1485 | R | XfaESVLORF1195P (93% identity) | XfaRH1ORF1500P | |
??? | S | S.XfaRiv5ORF1215P (100% identity) | S.XfaRH1ORF1500P | |
??? | M | M.XfaESVLORF1195P (99% identity) | M.XfaRH1ORF1500P | |
1515 | 142 aa hypothetical protein | |||
12125 | 110 aa hypothetical protein | |||
12130 | R | XfaRO8ORF10670P (100% identity) | XfaRH1ORF12140P | |
12135 | S | S.XfaSyVAORF2553P (100% identity) | S.XfaRH1ORF12140P | |
12140 | M | M.XfaRO8ORF10670P (100% identity) | M.XfaRH1ORF12140P | |
12145 | HNH endonuclease | |||
12145 | HNH endonuclease | |||
12150 | R | XfaRiv5ORF10690P (100% identity) | XfaRH1ORF12170P | |
12155 | restriction endonuclease subunit S | |||
12160 | S | S.XfaLM10ORF12110P (100% identity) | S.XfaRH1ORF12170P | |
12165 | 88 aa hypothetical protein | |||
12170 | M | M.XfaY3CORF10835P (100% identity) | M.XfaRH1ORF12170P | |
12175 | LysE family translocator | |||
12220 | 59 aa hypothetical protein | |||
12225 | R | XfaSyVAORF2573P (100% identity) | XfaRH1ORF12240P | |
12230 | 191 aa hypothetical protein | |||
12235 | S | S.XfaSyVAORF2573P (100% identity) | S.XfaRH1ORF12240P | |
12240 | M | M.XfaSyVAORF2573P (100% identity) | M.XfaRH1ORF12240P | |
12245 | 136 aa hypothetical protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
2255 | lysozyme | |||
2260 | M | M.XfaLM10ORF2260P (100% identity) | M.XfaRH1ORF2260P | |
2265 | type II toxin-antitoxin system HicB family | |||
3785 | IS200/IS605 family element transposase accessory | |||
3790 | M | M.XfaSyVAORF2398P (86% identity) | M.XfaRH1ORF3790P | |
3795 | BrnA antitoxin family protein | |||
6390 | lysozyme | |||
6395 | M | M.XfaLM10ORF6475P (100% identity) | M.XfaRH1ORF6395P | |
6400 | 240 aa hypothetical protein | |||
8055 | DEAD/DEAH box helicase | |||
8060 | M | M.XfaLM10ORF8050P (100% identity) | M.XfaRH1ORF8060P | |
8065 | lysozyme | |||
8970 | 65 aa hypothetical protein | |||
8980 | M | M.XfaY3CORF8005P (100% identity) | M.XfaRH1ORF8980P | |
8985 | R | XfaY3CORF8005P (100% identity) | XfaRH1ORF8980P | |
8990 | 52 aa hypothetical protein | |||
9410 | 148 aa hypothetical protein | |||
??? | M | M.XfaFORF8830P (100% identity) | M.XfaRH1ORF9415P | |
9425 | R | XfaY3CORF8440P (100% identity) | XfaRH1ORF9415P | |
9430 | 80 aa hypothetical protein | |||
9630 | DNA primase | |||
9635 | R | XfaLM10ORF9650P (100% identity) | XfaRH1ORF9640P | |
9640 | M | M.XfaY3CORF8660P (100% identity) | M.XfaRH1ORF9640P | |
9645 | tryptophan--tRNA ligase | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
5665 | 3-oxoacyl-ACP synthase III | |||
5670 | M | M.XfaRiv5ORF4780P (100% identity) | M.XfaRH1ORF5670P | |
5675 | 72 aa hypothetical protein | |||
5680 | R | Xfav25ORF6835P (100% identity) | XfaRH1ORF5670P | |
5685 | alpha/beta fold hydrolase |