Escherichia coli SCU-387 |
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Putative Escherichia coli SCU-387 RM systems
Ref: Stephens,C. et al. unpublished
REBASE ref # 30306
| Sequence length: | GenBank #: | |
| Chromosome: | 5,329,017 bp | CP051688 |
| plasmid pSCU-387-1: | 139,635 bp | CP051689 |
| plasmid pSCU-387-2: | 39,292 bp | CP051690 |
REBASE acronym: EcoSCU387
Org_num: 40075
All begin HHJ48_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3040 | endoribonuclease SymE | |||
| 3045 | S | S.SflC32ORFCP (100% identity) | S.EcoSCU387ORF3050P | |
| 3050 | M | M.SspS13ORF3945P (100% identity) | M.EcoSCU387ORF3050P | |
| 3055 | R | SflC32ORFCP (100% identity) | EcoSCU387ORF3050P | |
| 3060 | 322 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 15 | DUF3850 domain-containing protein | |||
| 20 | M | M.SflFF35ORF20P (100% identity) | M.EcoSCU387ORF20P | |
| 25 | 330 aa hypothetical protein | |||
| 1505 | conjugal transfer protein TraD | |||
| 1510 | V | V.EcoM9803ORF8185P (99% identity) | V.EcoSCU387ORF1515P | |
| 1515 | M | M.Mmo12289ORF1444P (97% identity) | GCGCGC | M.EcoSCU387ORF1515P |
| 1520 | R | Mmo12289ORF1444P (100% identity) | GCGCGC | EcoSCU387ORF1515P |
| 1525 | 109 aa hypothetical protein | |||
| 12740 | tellurite resistance protein | |||
| 12760 | M | M.SflC32ORFBP (100% identity) | M.EcoSCU387ORF12760P | |
| 12765 | TrmB family transcriptional regulator | |||
| 13840 | holin | |||
| 13860 | M | M.EcoUS12ORF13970P (100% identity) | A | M.EcoSCU387ORF13860P |
| 13865 | TrmB family transcriptional regulator | |||
| 13870 | DUF262 domain-containing protein | |||
| 13875 | R | R2.EcosS3ORF2905P (100% identity) | EcoSCU387ORF13880P | |
| 13880 | M | M2.EcosS3ORF2905P (100% identity) | M.EcoSCU387ORF13880P | |
| 13885 | antitermination protein | |||
| 14520 | drug/metabolite exporter YedA | |||
| 14525 | V | V.SflC32DcmP (74% identity) | V.EcoSCU387DcmP | |
| 14530 | M | M.SflC32DcmP (100% identity) | CCWGG | M.EcoSCU387DcmP |
| 14535 | phosphohydrolase | |||
| 17815 | PerC family transcriptional regulator | |||
| 17820 | M | M.Eho218ORF16395P (100% identity) | M.EcoSCU387ORF17820P | |
| 17825 | DUF1382 family protein | |||
| 22325 | DNA-binding transcriptional regulator Fis | |||
| 22330 | M | M.SflC32ORFAP (100% identity) | ATGCAT | M.EcoSCU387ORF22330P |
| 22335 | DUF2556 family protein | |||
| 22925 | ribulose-phosphate 3-epimerase | |||
| 22930 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoSCU387DamP |
| 22935 | cell division protein DamX | |||
| plasmid pSCU-387-1 | ||||
| 26455 | 73 aa hypothetical protein | |||
| 26460 | M | M.Sso3885ORF23215P (100% identity) | SAY | M.EcoSCU387ORF26460P |
| 26465 | 103 aa hypothetical protein | |||
| plasmid pSCU-387-2 | ||||
| 26740 | 97 aa hypothetical protein | |||
| 26745 | M | M.Xca80ORFEP (100% identity) | M.EcoSCU387ORF26745P | |
| 26750 | 73 aa hypothetical protein | |||