Escherichia coli SCU-152 |
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Putative Escherichia coli SCU-152 RM systems
Ref: Stephens,C. et al. unpublished
REBASE ref # 30306
| Sequence length: | GenBank #: | |
| Chromosome: | 4,757,546 bp | CP051698 |
| plasmid pSCU-152-1: | 117,034 bp | CP051699 |
REBASE acronym: EcoSCU152
Org_num: 40069
All begin HHJ40_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 470 | 127 aa hypothetical protein | |||
| 475 | R | Eco22C23ORF580P (99% identity) | EcoSCU152ORF480P | |
| 480 | M | M.Eco22C23ORF580P (99% identity) | M.EcoSCU152ORF480P | |
| 485 | S | S.Eco22C23ORF580P (99% identity) | S.EcoSCU152ORF480P | |
| 490 | thymidylate synthase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1980 | cell division protein DamX | |||
| 1985 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoSCU152DamP |
| 1990 | ribulose-phosphate 3-epimerase | |||
| 2530 | DUF2556 family protein | |||
| 2535 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.EcoSCU152ORF2535P |
| 2540 | DNA-binding transcriptional regulator Fis | |||
| 7275 | flagella biosynthesis regulator Flk | |||
| 7280 | M | M.EcoRG044ORF7650P (100% identity) | M.EcoSCU152ORF7280P | |
| 7285 | Com family DNA-binding transcriptional | |||
| 9155 | phosphohydrolase | |||
| 9160 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoSCU152DcmP |
| 9165 | V | V.SsoSE61DcmP (100% identity) | V.EcoSCU152DcmP | |
| 9170 | drug/metabolite exporter YedA | |||
| 18620 | transposase | |||
| 18625 | R | R2.EcoXH993ORF23960P (98% identity) | EcoSCU152ORF18630P | |
| 18630 | M | M.EcoXH993ORF23960P (100% identity) | M.EcoSCU152ORF18630P | |
| 18635 | HNH endonuclease | |||
| 18630 | DNA cytosine methyltransferase | |||
| 18635 | R | EcoSTEC384ORFHP (96% identity) | EcoSCU152ORF18635P | |
| 18640 | HNH endonuclease | |||
| plasmid pSCU-152-1 | ||||
| 23145 | 73 aa hypothetical protein | |||
| 23150 | M | M.Sen527ORF25750P (99% identity) | M.EcoSCU152ORF23150P | |
| 23155 | 101 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 13250 | isocitrate dehydrogenase | |||
| 13255 | R | EcosEC27McrCP (100% identity) | EcoSCU152McrCP | |
| 13260 | R | EmaE2C08McrBP (100% identity) | EcoSCU152McrBP | |
| 13265 | IS3-like element IS3 family transposase | |||