Escherichia coli SCU-125 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli SCU-125 RM systems
Ref: Stephens,C. et al. unpublished
REBASE ref # 30306
| Sequence length: | GenBank #: | |
| Chromosome: | 5,053,537 bp | CP051700 |
| plasmid pSCU-125-1: | 120,617 bp | CP051701 |
| plasmid pSCU-125-2: | 93,339 bp | CP051702 |
REBASE acronym: EcoSCU125
Org_num: 40068
All begin HHJ38_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1150 | TrmB family transcriptional regulator | |||
| 1155 | M | M.SflC32ORFBP (100% identity) | M.EcoSCU125ORF1155P | |
| 1175 | tellurite resistance protein | |||
| 1515 | phosphohydrolase | |||
| 1520 | M | M.SflC32DcmP (100% identity) | CCWGG | M.EcoSCU125DcmP |
| 1525 | V | V.SflC32DcmP (74% identity) | V.EcoSCU125DcmP | |
| 1530 | drug/metabolite exporter YedA | |||
| 5510 | DUF1737 domain-containing protein | |||
| 5530 | M | M.Eco6PORF5060P (100% identity) | A | M.EcoSCU125ORF5530P |
| 5535 | TrmB family transcriptional regulator | |||
| 12160 | sigma 54-interacting transcriptional regulator | |||
| 12165 | R | EcoR2ORF4510P (100% identity) | EcoSCU125ORF12165P | |
| 12170 | IS3 family transposase | |||
| 13415 | transposase | |||
| 13420 | R | SflFF80ORF21000P (100% identity) | YGGCCR | EcoSCU125ORF13425P |
| 13425 | M | M.SflFF80ORF21000P (100% identity) | YGGCCR | M.EcoSCU125ORF13425P |
| 13435 | transposase | |||
| 17745 | cell division protein DamX | |||
| 17750 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoSCU125DamP |
| 17755 | ribulose-phosphate 3-epimerase | |||
| 18345 | DUF2556 family protein | |||
| 18350 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoSCU125ORF18350P |
| 18355 | site-specific integrase | |||
| 22485 | DUF1382 family protein | |||
| 22490 | M | M.EcosA33ORF17935P (99% identity) | M.EcoSCU125ORF22490P | |
| 22495 | PerC family transcriptional regulator | |||
| 24530 | PerC family transcriptional regulator | |||
| 24535 | M | M.SflFF35ORF16050P (100% identity) | GATC | M.EcoSCU125ORF24535P |
| 24540 | LexA family transcriptional regulator | |||
| plasmid pSCU-125-1 | ||||
| 25265 | 73 aa hypothetical protein | |||
| 25270 | M | M.Sfl0030ORFCP (100% identity) | SAY | M.EcoSCU125ORF25270P |
| 25275 | 103 aa hypothetical protein | |||
| plasmid pSCU-125-2 | ||||
| 25485 | 104 aa hypothetical protein | |||
| 25490 | M | M.Sso866ORF27155P (100% identity) | M.EcoSCU125ORF25490P | |
| 25495 | 73 aa hypothetical protein | |||