Escherichia coli SCU-123 |
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Putative Escherichia coli SCU-123 RM systems
Ref: Stephens,C. et al. unpublished
REBASE ref # 30306
| Sequence length: | GenBank #: | |
| Chromosome: | 5,048,496 bp | CP051711 |
| plasmid pSCU-123-1: | 116,892 bp | CP051712 |
| plasmid pSCU-123-2: | 94,616 bp | CP051713 |
REBASE acronym: EcoSCU123
Org_num: 40066
All begin HHJ36_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3175 | drug/metabolite exporter YedA | |||
| 3180 | V | V.EcosC25DcmP (100% identity) | V.EcoSCU123DcmP | |
| 3185 | M | M.SflC32DcmP (100% identity) | CCWGG | M.EcoSCU123DcmP |
| 3190 | phosphohydrolase | |||
| 7345 | LexA family transcriptional regulator | |||
| 7350 | M | M.EcoY26ORF4515P (100% identity) | GATC | M.EcoSCU123ORF7350P |
| 7355 | PerC family transcriptional regulator | |||
| 10945 | DNA-binding transcriptional regulator Fis | |||
| 10950 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoSCU123ORF10950P |
| 10955 | DUF2556 family protein | |||
| 11545 | ribulose-phosphate 3-epimerase | |||
| 11550 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoSCU123DamP |
| 11555 | cell division protein DamX | |||
| 16815 | 97 aa hypothetical protein | |||
| 16820 | R | EcoSCU108ORF16815P (100% identity) | EcoSCU123ORF16820P | |
| 16825 | 607 aa hypothetical protein | |||
| 16830 | histidine kinase | |||
| 16835 | M | M.Sen5773ORF4471P (100% identity) | RCCGGY | M.EcoSCU123ORF16835P |
| 16840 | 174 aa hypothetical protein | |||
| 17085 | IS3 family transposase | |||
| 17090 | M | M2.EcosEC4ORF20110P (100% identity) | GGTCTC | M1.EcoSCU123ORF17090P |
| 17095 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M2.EcoSCU123ORF17090P |
| 17100 | R | EcosS9ORF2810P (100% identity) | GGTCTC | EcoSCU123ORF17090P |
| 17105 | McrC family protein | |||
| 23990 | TrmB family transcriptional regulator | |||
| 23995 | M | M.SboBSORF1444P (100% identity) | A | M.EcoSCU123ORF23995P |
| 24015 | DUF1737 domain-containing protein | |||
| 24375 | TrmB family transcriptional regulator | |||
| 24380 | M | M.SflC32ORFBP (100% identity) | M.EcoSCU123ORF24380P | |
| 24400 | tellurite resistance protein | |||
| plasmid pSCU-123-1 | ||||
| 25040 | 73 aa hypothetical protein | |||
| 25045 | M | M.Sfl0030ORFCP (100% identity) | SAY | M.EcoSCU123ORF25045P |
| 25050 | 102 aa hypothetical protein | |||
| plasmid pSCU-123-2 | ||||
| 25205 | 102 aa hypothetical protein | |||
| 25210 | M | M.Sso866ORF27155P (100% identity) | M.EcoSCU123ORF25210P | |
| 25215 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 7145 | DinI-like family protein | |||
| 7150 | R | EspFAAGmrSDP (100% identity) | EcoSCU123GmrSDP | |
| 7155 | recombinase family protein | |||
| 17100 | Alw26I/Eco31I/Esp3I family type II restriction | |||
| 17105 | R | EcosS9McrCP (100% identity) | EcoSCU123McrCP | |
| 17110 | R | EcosS3McrBP (100% identity) | EcoSCU123McrBP | |
| 17115 | glycosyltransferase family 2 protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 23120 | recombination protein NinB | |||
| 23125 | M | M.EcosC25ORF16305P (100% identity) | GATC | M.EcoSCU123ORF23125P |
| 23130 | NinE family protein | |||