Escherichia coli SCU-116 |
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Putative Escherichia coli SCU-116 RM systems
Ref: Stephens,C. et al. unpublished
REBASE ref # 30306
| Sequence length: | GenBank #: | |
| Chromosome: | 5,007,984 bp | CP051719 |
| plasmid pSCU-116-1: | 83,503 bp | CP051720 |
| plasmid pSCU-116-2: | 65,217 bp | CP051721 |
REBASE acronym: EcoSCU116
Org_num: 40063
All begin HHJ31_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17255 | endoribonuclease SymE | |||
| 17260 | S | S.SflC32ORFCP (100% identity) | S.EcoSCU116ORF17265P | |
| 17265 | M | M.SspS13ORF3945P (100% identity) | M.EcoSCU116ORF17265P | |
| 17270 | R | SflC32ORFCP (100% identity) | EcoSCU116ORF17265P | |
| 17275 | 322 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 305 | TrmB family transcriptional regulator | |||
| 310 | M | M.SflC32ORFBP (100% identity) | M.EcoSCU116ORF310P | |
| 330 | tellurite resistance protein | |||
| 3610 | drug/metabolite exporter YedA | |||
| 3615 | V | V.EcosEC7DcmP (100% identity) | V.EcoSCU116DcmP | |
| 3620 | M | M.SdySWHE2DcmP (100% identity) | CCWGG | M.EcoSCU116DcmP |
| 3625 | phosphohydrolase | |||
| 11170 | DNA-binding transcriptional regulator Fis | |||
| 11175 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoSCU116ORF11175P |
| 11180 | DUF2556 family protein | |||
| 11780 | ribulose-phosphate 3-epimerase | |||
| 11785 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoSCU116DamP |
| 11790 | cell division protein DamX | |||
| 24065 | TrmB family transcriptional regulator | |||
| 24070 | M | M.EcoY26ORF70P (100% identity) | A | M.EcoSCU116ORF24070P |
| 24090 | DUF1737 domain-containing protein | |||
| plasmid pSCU-116-1 | ||||
| 24200 | 104 aa hypothetical protein | |||
| 24205 | M | M.Sso866ORF27155P (100% identity) | M.EcoSCU116ORF24205P | |
| 24210 | 73 aa hypothetical protein | |||
| plasmid pSCU-116-2 | ||||
| 24740 | conjugal transfer mating pair stabilization | |||
| ??? | M | M.Fnu048ORFOP (100% identity) | M.EcoSCU116ORF24745P | |
| 24750 | 102 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 23200 | recombination protein NinB | |||
| 23205 | M | M.EcosC25ORF16305P (100% identity) | GATC | M.EcoSCU116ORF23205P |
| 23210 | NinE family protein | |||