Avibacterium paragallinarum ADL-AP01 |
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Putative Avibacterium paragallinarum ADL-AP01 RM systems
Ref: Byukusenge,M. et al. unpublished
REBASE ref # 30286
Complete sequence: 2,415,542 bp
GenBank #: CP051642
REBASE acronym: ApaAP01
Org_num: 39969
All begin HHJ56_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 9095 | site-specific integrase | |||
| 9100 | S | S1.ApaAP17ORF9105P (100% identity) | S1.ApaAP01ORF9105P | |
| 9105 | M | M.ApaESV135ORF11005P (100% identity) | M.ApaAP01ORF9105P | |
| 9110 | S | S2.ApaAP17ORF9105P (100% identity) | S2.ApaAP01ORF9105P | |
| 9115 | S | S1.ApaESV135ORF11005P (100% identity) | S3.ApaAP01ORF9105P | |
| 9120 | MFS transporter | |||
| 10745 | DUF927 domain-containing protein | |||
| 10750 | R | ApaAP17ORF10770P (100% identity) | ApaAP01ORF10770P | |
| 10755 | MFS transporter | |||
| 10760 | 308 aa hypothetical protein | |||
| 10765 | S | S.ApaESV135ORF11455P (100% identity) | S.ApaAP01ORF10770P | |
| 10770 | M | M.ApaAP16ORF10770P (98% identity) | M.ApaAP01ORF10770P | |
| 10775 | 197 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 535 | phosphoglycerate dehydrogenase | |||
| 540 | RM | ApaAP17ORF540P (98% identity) | ApaAP01ORF540P | |
| 545 | endolytic transglycosylase MltG | |||
| 4155 | ArsC family reductase | |||
| 4160 | M | M2.ApaESV135ORF3980P (100% identity) | M1.ApaAP01ORF4160P | |
| 4165 | R | ApasMORFGP (100% identity) | ApaAP01ORF4160P | |
| 4170 | M | M1.ApaESV135ORF3980P (100% identity) | M2.ApaAP01ORF4160P | |
| 4175 | threonine synthase | |||
| 6520 | valine--tRNA ligase | |||
| 6525 | R | ApaESV135ORF2500P (100% identity) | ApaAP01ORF6530P | |
| ??? | M | M.ApaESV135ORF2500P (100% identity) | M.ApaAP01ORF6530P | |
| 6535 | 159 aa hypothetical protein | |||
| 6865 | DUF1367 family protein | |||
| 6870 | M | M.ApaESV135ORF2155P (100% identity) | M.ApaAP01ORF6870P | |
| 6875 | ATP-binding protein | |||
| 7010 | 94 aa hypothetical protein | |||
| 7015 | M | M.ApaESV135ORF2010P (100% identity) | M.ApaAP01ORF7015P | |
| 7020 | SAM-dependent DNA methyltransferase | |||
| 7015 | class I SAM-dependent methyltransferase | |||
| ??? | M | M.Apa2015ORF2100P (100% identity) | M.ApaAP01ORF7020P | |
| 7030 | 287 aa hypothetical protein | |||
| 10960 | helix-turn-helix transcriptional regulator | |||
| 10965 | M | M1.ApaESV135ORF11650P (100% identity) | M1.ApaAP01ORF10965P | |
| 10970 | M | M2.ApaESV135ORF11650P (100% identity) | M2.ApaAP01ORF10965P | |
| 10975 | RM | ApaESV135ORF11650P (100% identity) | ApaAP01ORF10965P | |
| 10980 | 30S ribosomal protein S12 methylthiotransferase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4310 | IS3 family transposase | |||
| 4315 | R | ApaESV135ORF3825P (100% identity) | ApaAP01ORF4320P | |
| 4320 | M | M1.ApaAP15ORF4335P (100% identity) | M1.ApaAP01ORF4320P | |
| 4325 | M | M.ApaESV135ORF3825P (39% identity) | M2.ApaAP01ORF4320P | |
| 4330 | LysR family transcriptional regulator | |||
| 9050 | aminoacyl-histidine dipeptidase | |||
| 9055 | R | ApaESV135ORF11050P (100% identity) | ApaAP01ORF9060P | |
| 9060 | M | M.ApaESV135ORF11050P (100% identity) | M.ApaAP01ORF9060P | |
| 9065 | 110 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1675 | 3-dehydroquinate synthase | |||
| ??? | M | M.ApaESV135ORF7360P (100% identity) | M.ApaAP01ORF1680P | |
| 1685 | DUF721 domain-containing protein | |||