Avibacterium paragallinarum ADL-AP02 |
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Putative Avibacterium paragallinarum ADL-AP02 RM systems
Ref: Byukusenge,M. et al. unpublished
REBASE ref # 30286
Complete sequence: 2,416,187 bp
GenBank #: CP051641
REBASE acronym: ApaAP02
Org_num: 39970
All begin HHJ57_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 9090 | site-specific integrase | |||
| 9095 | S | S1.ApaAP17ORF9105P (100% identity) | S1.ApaAP02ORF9100P | |
| 9100 | M | M.ApaESV135ORF11005P (100% identity) | M.ApaAP02ORF9100P | |
| 9105 | S | S2.ApaAP17ORF9105P (100% identity) | S2.ApaAP02ORF9100P | |
| 9110 | S | S1.ApaESV135ORF11005P (100% identity) | S3.ApaAP02ORF9100P | |
| 9115 | MFS transporter | |||
| 10735 | DUF927 domain-containing protein | |||
| 10740 | R | ApaAP17ORF10770P (100% identity) | ApaAP02ORF10760P | |
| 10745 | MFS transporter | |||
| 10750 | 308 aa hypothetical protein | |||
| 10755 | S | S.ApaESV135ORF11455P (100% identity) | S.ApaAP02ORF10760P | |
| 10760 | M | M.Apa221ORFGP (96% identity) | M.ApaAP02ORF10760P | |
| 10765 | 197 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 535 | phosphoglycerate dehydrogenase | |||
| 540 | RM | ApaESV135ORF8505P (100% identity) | ApaAP02ORF540P | |
| 545 | endolytic transglycosylase MltG | |||
| 4150 | ArsC family reductase | |||
| 4155 | M | M2.ApaESV135ORF3980P (100% identity) | M1.ApaAP02ORF4155P | |
| 4160 | R | ApasMORFGP (100% identity) | ApaAP02ORF4155P | |
| 4165 | M | M1.ApaESV135ORF3980P (100% identity) | M2.ApaAP02ORF4155P | |
| 4170 | threonine synthase | |||
| 6520 | valine--tRNA ligase | |||
| 6525 | R | ApaESV135ORF2500P (100% identity) | ApaAP02ORF6530P | |
| ??? | M | M.ApaESV135ORF2500P (100% identity) | M.ApaAP02ORF6530P | |
| 6535 | 159 aa hypothetical protein | |||
| 6865 | DUF1367 family protein | |||
| 6870 | M | M.ApaESV135ORF2155P (100% identity) | M.ApaAP02ORF6870P | |
| 6875 | ATP-binding protein | |||
| 7010 | 94 aa hypothetical protein | |||
| 7015 | M | M.ApaESV135ORF2010P (100% identity) | M.ApaAP02ORF7015P | |
| 7020 | SAM-dependent DNA methyltransferase | |||
| 10950 | helix-turn-helix transcriptional regulator | |||
| 10955 | M | M1.ApaESV135ORF11650P (100% identity) | M1.ApaAP02ORF10955P | |
| 10960 | M | M2.ApaESV135ORF11650P (100% identity) | M2.ApaAP02ORF10955P | |
| 10965 | RM | ApaESV135ORF11650P (100% identity) | ApaAP02ORF10955P | |
| 10970 | 30S ribosomal protein S12 methylthiotransferase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4305 | IS3 family transposase | |||
| 4310 | R | ApaESV135ORF3825P (100% identity) | ApaAP02ORF4315P | |
| 4315 | M | M1.ApaAP15ORF4335P (100% identity) | M1.ApaAP02ORF4315P | |
| 4320 | M | M.ApaESV135ORF3825P (39% identity) | M2.ApaAP02ORF4315P | |
| 4325 | LysR family transcriptional regulator | |||
| 9045 | aminoacyl-histidine dipeptidase | |||
| 9050 | R | ApaESV135ORF11050P (100% identity) | ApaAP02ORF9055P | |
| 9055 | M | M.ApaESV135ORF11050P (100% identity) | M.ApaAP02ORF9055P | |
| 9060 | 100 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1670 | 3-dehydroquinate synthase | |||
| ??? | M | M.ApaESV135ORF7360P (100% identity) | M.ApaAP02ORF1675P | |
| 1680 | DUF721 domain-containing protein | |||