Avibacterium paragallinarum ADL-AP10 |
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Putative Avibacterium paragallinarum ADL-AP10 RM systems
Ref: Byukusenge,M. et al. unpublished
REBASE ref # 30286
Complete sequence: 2,415,552 bp
GenBank #: CP051639
REBASE acronym: ApaAP10
Org_num: 39972
All begin HHJ59_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 9105 | site-specific integrase | |||
| 9110 | S | S1.ApaAP17ORF9105P (100% identity) | S1.ApaAP10ORF9115P | |
| 9115 | M | M.ApaESV135ORF11005P (100% identity) | M.ApaAP10ORF9115P | |
| 9120 | S | S2.ApaAP17ORF9105P (100% identity) | S2.ApaAP10ORF9115P | |
| 9125 | S | S1.ApaESV135ORF11005P (100% identity) | S3.ApaAP10ORF9115P | |
| 9130 | MFS transporter | |||
| 10755 | DUF927 domain-containing protein | |||
| 10760 | R | ApaAP17ORF10770P (100% identity) | ApaAP10ORF10785P | |
| 10765 | MFS transporter | |||
| 10770 | 308 aa hypothetical protein | |||
| 10775 | S | S.Apap4ORF12860P (48% identity) | S2.ApaAP10ORF10785P | |
| 10780 | S | S.ApasMORFBP (27% identity) | S1.ApaAP10ORF10785P | |
| 10785 | M | M.ApasMORFBP (99% identity) | M.ApaAP10ORF10785P | |
| 10790 | 197 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 530 | phosphoglycerate dehydrogenase | |||
| 535 | RM | ApaESV135ORF8505P (100% identity) | ApaAP10ORF535P | |
| 540 | endolytic transglycosylase MltG | |||
| 4160 | ArsC family reductase | |||
| 4165 | M | M2.ApaESV135ORF3980P (100% identity) | M1.ApaAP10ORF4165P | |
| 4170 | R | ApasMORFGP (100% identity) | ApaAP10ORF4165P | |
| 4175 | M | M1.ApaESV135ORF3980P (100% identity) | M2.ApaAP10ORF4165P | |
| 4180 | threonine synthase | |||
| 6530 | valine--tRNA ligase | |||
| 6535 | R | ApaESV135ORF2500P (100% identity) | ApaAP10ORF6540P | |
| ??? | M | M.ApaESV135ORF2500P (100% identity) | M.ApaAP10ORF6540P | |
| 6545 | 159 aa hypothetical protein | |||
| 6875 | DUF1367 family protein | |||
| 6880 | M | M.ApaESV135ORF2155P (100% identity) | M.ApaAP10ORF6880P | |
| 6885 | ATP-binding protein | |||
| 7025 | 94 aa hypothetical protein | |||
| 7030 | M | M.ApaESV135ORF2010P (100% identity) | M.ApaAP10ORF7030P | |
| 7035 | SAM-dependent DNA methyltransferase | |||
| 7035 | SAM-dependent DNA methyltransferase | |||
| 7040 | M | M1.ApaESV135ORF2000P (100% identity) | M2.ApaAP10ORF7035P | |
| 7045 | 287 aa hypothetical protein | |||
| 10980 | helix-turn-helix transcriptional regulator | |||
| 10985 | M | M1.ApaESV135ORF11650P (100% identity) | M1.ApaAP10ORF10985P | |
| 10990 | M | M2.ApaESV135ORF11650P (100% identity) | M2.ApaAP10ORF10985P | |
| 10995 | RM | ApaESV135ORF11650P (100% identity) | ApaAP10ORF10985P | |
| 11000 | 30S ribosomal protein S12 methylthiotransferase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4315 | IS3 family transposase | |||
| 4320 | R | ApaESV135ORF3825P (100% identity) | ApaAP10ORF4325P | |
| 4325 | M | M1.ApaAP15ORF4335P (100% identity) | M1.ApaAP10ORF4325P | |
| 4330 | M | M.ApaESV135ORF3825P (39% identity) | M2.ApaAP10ORF4325P | |
| 4335 | LysR family transcriptional regulator | |||
| 9060 | aminoacyl-histidine dipeptidase | |||
| 9065 | R | ApaESV135ORF11050P (100% identity) | ApaAP10ORF9070P | |
| 9070 | M | M.ApaESV135ORF11050P (100% identity) | M.ApaAP10ORF9070P | |
| 9075 | 101 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1670 | 3-dehydroquinate synthase | |||
| ??? | M | M.ApaESV135ORF7360P (100% identity) | M.ApaAP10ORF1675P | |
| 1680 | DUF721 domain-containing protein | |||