Avibacterium paragallinarum ADL-AP16 |
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Putative Avibacterium paragallinarum ADL-AP16 RM systems
Ref: Byukusenge,M. et al. unpublished
REBASE ref # 30286
Complete sequence: 2,415,855 bp
GenBank #: CP051637
REBASE acronym: ApaAP16
Org_num: 39974
All begin HHJ61_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 9100 | site-specific integrase | |||
| 9105 | S | S1.ApaAP17ORF9105P (100% identity) | S1.ApaAP16ORF9110P | |
| 9110 | M | M.ApaESV135ORF11005P (100% identity) | M.ApaAP16ORF9110P | |
| 9115 | S | S2.ApaAP17ORF9105P (100% identity) | S2.ApaAP16ORF9110P | |
| 9120 | S | S1.ApaESV135ORF11005P (100% identity) | S3.ApaAP16ORF9110P | |
| 9125 | MFS transporter | |||
| 10745 | DUF927 domain-containing protein | |||
| 10750 | R | ApaAP17ORF10770P (100% identity) | ApaAP16ORF10770P | |
| 10755 | MFS transporter | |||
| 10760 | 308 aa hypothetical protein | |||
| 10765 | S | S.ApaESV135ORF11455P (100% identity) | S.ApaAP16ORF10770P | |
| 10770 | M | M.ApaAP10ORF10785P (95% identity) | M.ApaAP16ORF10770P | |
| 10780 | 197 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 535 | phosphoglycerate dehydrogenase | |||
| 540 | RM | ApaAP17ORF540P (99% identity) | ApaAP16ORF540P | |
| 545 | endolytic transglycosylase MltG | |||
| 4155 | ArsC family reductase | |||
| 4160 | M | M2.ApaESV135ORF3980P (100% identity) | M1.ApaAP16ORF4160P | |
| 4165 | R | ApasMORFGP (100% identity) | ApaAP16ORF4160P | |
| 4170 | M | M1.ApaESV135ORF3980P (100% identity) | M2.ApaAP16ORF4160P | |
| 4175 | threonine synthase | |||
| 6525 | valine--tRNA ligase | |||
| 6530 | R | ApaESV135ORF2500P (100% identity) | ApaAP16ORF6535P | |
| ??? | M | M.ApaESV135ORF2500P (100% identity) | M.ApaAP16ORF6535P | |
| 6540 | 159 aa hypothetical protein | |||
| 6870 | DUF1367 family protein | |||
| 6875 | M | M.ApaESV135ORF2155P (100% identity) | M.ApaAP16ORF6875P | |
| 6880 | ATP-binding protein | |||
| 7015 | 94 aa hypothetical protein | |||
| 7020 | M | M.ApaESV135ORF2010P (100% identity) | M.ApaAP16ORF7020P | |
| 7025 | SAM-dependent DNA methyltransferase | |||
| 7025 | SAM-dependent DNA methyltransferase | |||
| 7030 | M | M1.ApaESV135ORF2000P (100% identity) | M2.ApaAP16ORF7025P | |
| 7035 | 287 aa hypothetical protein | |||
| 10965 | helix-turn-helix transcriptional regulator | |||
| 10970 | M | M1.ApaESV135ORF11650P (100% identity) | M1.ApaAP16ORF10970P | |
| 10975 | M | M2.ApaESV135ORF11650P (100% identity) | M2.ApaAP16ORF10970P | |
| 10980 | RM | ApaESV135ORF11650P (100% identity) | ApaAP16ORF10970P | |
| 10985 | 30S ribosomal protein S12 methylthiotransferase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4310 | IS3 family transposase | |||
| 4315 | R | ApaESV135ORF3825P (100% identity) | ApaAP16ORF4320P | |
| ??? | M | M.ApaAP07ORF3930P (100% identity) | M.ApaAP16ORF4320P | |
| 4330 | LysR family transcriptional regulator | |||
| 9055 | aminoacyl-histidine dipeptidase | |||
| 9060 | R | ApaESV135ORF11050P (100% identity) | ApaAP16ORF9065P | |
| 9065 | M | M.ApaESV135ORF11050P (100% identity) | M.ApaAP16ORF9065P | |
| 9070 | 100 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1675 | 3-dehydroquinate synthase | |||
| ??? | M | M.ApaESV135ORF7360P (100% identity) | M.ApaAP16ORF1680P | |
| 1685 | DUF721 domain-containing protein | |||