Limnospira fusiformis SAG 85.79 |
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Putative Limnospira fusiformis SAG 85.79 RM systems
Ref: Hicks,M.R. et al. unpublished
REBASE ref # 30512
Complete sequence: 6,423,694 bp
GenBank #: CP051185
REBASE acronym: Lfu8579
Org_num: 40638
All begin HFV01_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3920 | UPF0175 family protein | |||
| 3925 | R | Asp8005ORF50209P (99% identity) | Lfu8579ORF3950P | |
| 3930 | HigA family addiction module antidote protein | |||
| 3935 | 37 aa hypothetical protein | |||
| 3940 | S | S.Asp8005ORF50209P (100% identity) | S2.Lfu8579ORF3950P | |
| 3945 | S | S.LfuKN01ORF3470P (99% identity) | S1.Lfu8579ORF3950P | |
| 3950 | M | M.LfuKN01ORF3470P (98% identity) | M.Lfu8579ORF3950P | |
| 3955 | type II toxin-antitoxin system PemK/MazF family | |||
| 13570 | 79 aa hypothetical protein | |||
| 13575 | R | AmaCSORF4672P (99% identity) | Lfu8579ORF13645P | |
| 13580 | DUF2442 domain-containing protein | |||
| 13585 | DUF4926 domain-containing protein | |||
| 13590 | 110 aa hypothetical protein | |||
| 13595 | S | S.Asp92ORFKP (69% identity) | S.Lfu8579ORF13645P | |
| 13600 | type II toxin-antitoxin system HicB family | |||
| 13605 | 121 aa hypothetical protein | |||
| 13610 | DUF5615 family PIN-like protein | |||
| 13615 | DUF433 domain-containing protein | |||
| 13620 | PIN domain-containing protein | |||
| 13625 | transposase | |||
| 13630 | IS607 family transposase | |||
| 13635 | 105 aa hypothetical protein | |||
| 13640 | 83 aa hypothetical protein | |||
| 13645 | M | M.AplC1ORF540220P (98% identity) | M.Lfu8579ORF13645P | |
| 13650 | transcriptional regulator | |||
| 21890 | 103 aa hypothetical protein | |||
| 21895 | R | AmaCSORF3575P (99% identity) | Lfu8579ORF21900P | |
| 21900 | M | M.LinBM01ORF5200P (100% identity) | M.Lfu8579ORF21900P | |
| 21905 | 101 aa hypothetical protein | |||
| 21910 | type II toxin-antitoxin system VapC family | |||
| 21915 | 80 aa hypothetical protein | |||
| 21920 | 157 aa hypothetical protein | |||
| 21925 | PIN domain-containing protein | |||
| 21930 | 46 aa hypothetical protein | |||
| 21935 | S | S.Asp92ORFZP (69% identity) | S.Lfu8579ORF21900P | |
| 21940 | 71 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 500 | chemotaxis protein CheC | |||
| 505 | M | M.LfuKN01ORF350P (100% identity) | M.Lfu8579ORF505P | |
| 510 | R | LinBM01ORF24775P (100% identity) | Lfu8579ORF505P | |
| 515 | cytochrome C biogenesis protein CcdA | |||
| 1230 | carbamoyl-phosphate synthase large subunit | |||
| 1235 | M | M.LfuKN01ORF950P (99% identity) | M.Lfu8579ORF1235P | |
| 1240 | R | LfuKN01ORF950P (100% identity) | Lfu8579ORF1235P | |
| 1245 | helix-turn-helix transcriptional regulator | |||
| 2175 | 228 aa hypothetical protein | |||
| 2180 | RM | LinBM01ORF23735P (100% identity) | Lfu8579ORF2180P | |
| 2185 | MerR family transcriptional regulator | |||
| 2320 | SAM-dependent chlorinase/fluorinase | |||
| 2325 | M | M.Asp8005ORF60368P (100% identity) | M.Lfu8579ORF2325P | |
| 2330 | UDP-N-acetylglucosamine 2-epimerase | |||
| 2450 | adenosylmethionine decarboxylase | |||
| 2455 | M | M.LinBM01ORF23995P (99% identity) | M.Lfu8579ORF2455P | |
| 2460 | 46 aa hypothetical protein | |||
| 4030 | tetratricopeptide repeat protein | |||
| 4035 | R | Ssp6312ORF849P (85% identity) | Lfu8579ORF4040P | |
| 4040 | M | M.Pru82ORF147P (86% identity) | M.Lfu8579ORF4040P | |
| 4045 | 115 aa hypothetical protein | |||
| 4155 | bifunctional UDP-N-acetylglucosamine | |||
| 4160 | R | Asp92ORFH1P (99% identity) | Lfu8579ORF4165P | |
| 4165 | M | M.Asp92ORFH1P (99% identity) | M.Lfu8579ORF4165P | |
| 4170 | DUF1517 domain-containing protein | |||
| 4810 | NAD(P)H-binding protein | |||
| 4815 | M | M.LfuKN01ORF3340P (100% identity) | M.Lfu8579ORF4815P | |
| ??? | C | C.Asp92ORFGP (100% identity) | C.Lfu8579ORF4815P | |
| 4825 | R | LfuKN01ORF3340P (100% identity) | Lfu8579ORF4815P | |
| 4830 | 219 aa hypothetical protein | |||
| 6755 | M | M.LfuKN01ORF5780P (86% identity) | M.Lfu8579ORF6755P | |
| 6760 | 153 aa hypothetical protein | |||
| 6995 | restriction endonuclease | |||
| 7000 | M | M.LfuKN01ORF5980P (100% identity) | M.Lfu8579ORF7000P | |
| 7005 | R | LfuKN01ORF5980P (100% identity) | Lfu8579ORF7000P | |
| 7010 | C | C.LfuKN01ORF5980P (100% identity) | C.Lfu8579ORF7000P | |
| 7015 | DUF1092 family protein | |||
| 7115 | 3-isopropylmalate dehydrogenase | |||
| 7120 | M | M.LfuKN01ORF6105P (90% identity) | M.Lfu8579ORF7120P | |
| 7125 | AAA family ATPase | |||
| 7515 | CBS domain-containing protein | |||
| 7520 | C | C.LfuKN01ORF6475P (100% identity) | C.Lfu8579ORF7535P | |
| ??? | R | LfuKN01ORF6475P (100% identity) | Lfu8579ORF7535P | |
| ??? | M | M.LfuKN01ORF6475P (100% identity) | M.Lfu8579ORF7535P | |
| 7545 | 16S rRNA (cytosine(967)-C(5))-methyltransferase | |||
| 8495 | cobalamin biosynthesis protein CobW | |||
| 8500 | R | LinBM01ORF17350P (99% identity) | Lfu8579ORF8505P | |
| 8505 | M | M.LfuKN01ORF7320P (100% identity) | M.Lfu8579ORF8505P | |
| 8510 | 290 aa hypothetical protein | |||
| 10005 | CHAT domain-containing protein | |||
| 10010 | M | M.LfuKN01ORF8500P (100% identity) | M.Lfu8579ORF10010P | |
| 10015 | PIN/TRAM domain-containing protein | |||
| 10225 | ADP-ribosylglycohydrolase family protein | |||
| 10230 | M | M.LinBM01ORF15660P (100% identity) | M.Lfu8579ORF10230P | |
| 10235 | succinate dehydrogenase/fumarate reductase | |||
| 10630 | DUF2281 domain-containing protein | |||
| 10635 | RM | LinBM01ORF15225P (79% identity) | Lfu8579ORF10635P | |
| 10640 | 253 aa hypothetical protein | |||
| 14045 | S-(hydroxymethyl)glutathione dehydrogenase/class | |||
| 14050 | M | M.Asp92ORFLP (100% identity) | M.Lfu8579ORF14050P | |
| 14055 | NCS2 family permease | |||
| 15695 | glutathione S-transferase family protein | |||
| 15700 | M | M.LinBM01ORF10715P (100% identity) | M.Lfu8579ORF15700P | |
| 15705 | R | LinBM01ORF10715P (100% identity) | Lfu8579ORF15700P | |
| 15710 | IS200/IS605 family transposase | |||
| 17100 | allophycocyanin subunit beta | |||
| 17105 | M | M.Asp92ORFNP (96% identity) | M.Lfu8579ORF17105P | |
| 17110 | R | Asp92ORFNP (99% identity) | Lfu8579ORF17105P | |
| 17115 | TlyA family RNA methyltransferase | |||
| 17750 | beta-ketoacyl-ACP synthase | |||
| 17755 | M | M.LinBM01ORF8860P (99% identity) | M.Lfu8579ORF17755P | |
| 17765 | RIP metalloprotease RseP | |||
| 21545 | 716 aa hypothetical protein | |||
| 21550 | R | Asp92ORFPP (99% identity) | Lfu8579ORF21550P | |
| ??? | site-specific DNA-methyltransferase | |||
| 21550 | HindIII family type II restriction endonuclease | |||
| ??? | M | M.LfuKN01ORF24245P (99% identity) | M.Lfu8579ORF21555P | |
| 21560 | WD40 repeat domain-containing protein | |||
| 21800 | integron integrase | |||
| 21805 | M | M.AplDDORFB1P (100% identity) | M.Lfu8579ORF21805P | |
| 21810 | R | LinBM01ORF5260P (100% identity) | Lfu8579ORF21805P | |
| 21815 | 58 aa hypothetical protein | |||
| 23145 | esterase-like activity of phytase family | |||
| 23150 | RM | AmaCSORF2214P (96% identity) | GCTCCA | Lfu8579ORF23150P |
| 23155 | response regulator | |||
| 23270 | FAD-dependent oxidoreductase | |||
| ??? | R | LfuKN01ORF19175P (100% identity) | Lfu8579ORF23280P | |
| 23280 | M | M.LfuKN01ORF19175P (100% identity) | M.Lfu8579ORF23280P | |
| 23285 | homogentisate phytyltransferase | |||
| 25385 | aminotransferase class V-fold PLP-dependent | |||
| 25390 | M | M.SplZORFRP (100% identity) | M.Lfu8579ORF25390P | |
| 25395 | R | SplZORFRP (100% identity) | Lfu8579ORF25390P | |
| 25400 | phosphoribosyltransferase | |||
| 26070 | UbiA prenyltransferase family protein | |||
| 26075 | R | LinBM01ORF1220P (99% identity) | Lfu8579ORF26080P | |
| 26080 | M | M.LinBM01ORF1220P (100% identity) | M.Lfu8579ORF26080P | |
| 26085 | DUF2518 family protein | |||
| 27110 | asparagine synthase | |||
| 27115 | M | M.Asp92DndDP (98% identity) | M.Lfu8579DndDP | |
| 27120 | DNA phosphorothioation system sulfurtransferase | |||
| 27115 | DNA sulfur modification protein DndD | |||
| 27120 | M | M.AplDDDndCP (90% identity) | M.Lfu8579DndCP | |
| 27125 | HNH endonuclease | |||
| 29150 | DNA repair protein RecO | |||
| 29155 | R | LfuKN01ORF24650P (100% identity) | Lfu8579ORF29160P | |
| 29160 | M | M.LinBM01ORF26580P (100% identity) | M.Lfu8579ORF29160P | |
| 29165 | 65 aa hypothetical protein | |||
| 30300 | transposase | |||
| ??? | RM | AplDDORFUP (93% identity) | Lfu8579ORF30305P | |
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 19345 | 167 aa hypothetical protein | |||
| 19350 | M | M.AmaCSORF286P (85% identity) | M.Lfu8579ORF19350P | |
| 19355 | AAA family ATPase | |||
| 19360 | R | LinBM01ORF7435P (100% identity) | Lfu8579ORF19350P | |
| 19365 | glycosyltransferase family 4 protein | |||