Burkholderia pseudomallei isolate UKMD286 |
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Putative Burkholderia pseudomallei isolate UKMD286 RM systems
Ref: Nathan,S. unpublished
REBASE ref # 30372
| Sequence length: | GenBank #: | |
| chromosome 1: | 3,987,008 bp | LR595896 |
| chromosome 2: | 3,115,305 bp | LR595897 |
REBASE acronym: Bps286
Org_num: 40218
All begin UKMD286_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 2 | ||||
| 3888 | recombinase family protein | |||
| 3889 | R | BpsSW9ORF5553P (100% identity) | CCAYNNNNNNNCTTC | Bps286ORF3890P |
| 3890 | M | M.BpsSW9ORF5553P (100% identity) | CCAYNNNNNNNCTTC | M.Bps286ORF3890P |
| 3891 | S | S.BpsD286I (100% identity) | CCAYNNNNNNNCTTC | S.Bps286ORF3890P |
| 3892 | beta family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| ??? | R | BpsD286ORFFP (100% identity) | Bps286ORFAP | |
| ??? | M | M.BpsD286ORFFP (100% identity) | M.Bps286ORFAP | |
| 413 | Protein of unknown function family | |||
| chromosome 2 | ||||
| 5294 | tryptophan synthase, alpha subunit | |||
| 5295 | M | M.BspBGKORF4324P (100% identity) | GTWWAC | M.Bps286ORF5295P |
| 5296 | Tryptophan synthase beta chain | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 41 | outer membrane protein -like protein | |||
| 42 | M | M.BpsR15II (99% identity) | CACAG | M.Bps286ORF42P |
| 43 | R | BpsR15IIP (100% identity) | CACAG | Bps286ORF42P |
| 44 | porin | |||
| 3116 | bacteriophage tail protein I | |||
| 3117 | R | BpsD286IVP (100% identity) | Bps286ORF3118P | |
| 3118 | M | M.BpsD286IV (32% identity) | M.Bps286ORF3118P | |
| 3119 | DEAD/DEAH box helicase family protein | |||