Escherichia coli 54 |
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Putative Escherichia coli 54 RM systems
Ref: Dong,N. et al. unpublished
REBASE ref # 30270
Complete sequence: 4,659,816 bp
GenBank #: CP041284
REBASE acronym: Eco54
Org_num: 39986
All begin FK536_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 19720 | IS3-like element IS2 family transposase | |||
| 19725 | M | M.EcoYPE3ORF20380P (100% identity) | M.Eco54ORF19725P | |
| 19730 | S | S.EcoYPE3ORF20380P (100% identity) | S.Eco54ORF19725P | |
| 19735 | R | EcoYPE3ORF20380P (100% identity) | Eco54ORF19725P | |
| 19745 | NADPH-dependent aldehyde reductase Ahr | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1750 | cell division protein DamX | |||
| 1755 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco54DamP |
| 1760 | ribulose-phosphate 3-epimerase | |||
| 2395 | DUF2556 domain-containing protein | |||
| 2400 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco54ORF2400P |
| 2405 | DNA-binding transcriptional regulator Fis | |||
| 9185 | phosphohydrolase | |||
| 9190 | M | M.SspS13DcmP (100% identity) | CCWGG | M.Eco54DcmP |
| 9195 | V | V.SsoSE61DcmP (100% identity) | V.Eco54DcmP | |
| 9200 | drug/metabolite exporter YedA | |||
| 17585 | 379 aa hypothetical protein | |||
| 17590 | R | EcoYPE3ORF18250P (100% identity) | Eco54ORF17595P | |
| ??? | M | M.EcoSTB201ORF17690P (100% identity) | M.Eco54ORF17595P | |
| 17600 | 257 aa hypothetical protein | |||
| 19690 | HNH endonuclease | |||
| 19695 | R | SflFF17ORF19275P (100% identity) | Eco54ORF19695P | |
| 19700 | restriction endonuclease | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 19695 | HNH endonuclease | |||
| 19700 | R | EcoYPE3McrCP (100% identity) | Eco54McrCP | |
| 19705 | McrB family protein | |||
| 19700 | restriction endonuclease | |||
| 19705 | R | EcoYPE3McrBP (100% identity) | Eco54McrBP | |
| 19710 | DUF4942 domain-containing protein | |||