Salmonella enterica subsp. enterica serovar Indiana SI85 |
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Putative Salmonella enterica subsp. enterica serovar Indiana SI85 RM systems
Ref: Chen,Z. unpublished
REBASE ref # 29897
| Sequence length: | GenBank #: | |
| Chromosome: | 4,744,651 bp | CP050779 |
| plasmid pSI85-1: | 239,058 bp | CP050780 |
REBASE acronym: SenSI185
Org_num: 41096
All begin HEC77_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1740 | cell division protein DamX | |||
| 1745 | M | M.StyTDamP (100% identity) | GATC | M.SenSI185DamP |
| 1750 | ribulose-phosphate 3-epimerase | |||
| 2235 | DUF2556 family protein | |||
| 2240 | M | M.Sensp14178ORF2230P (100% identity) | ATGCAT | M.SenSI185ORF2240P |
| 2245 | DNA-binding transcriptional regulator Fis | |||
| 3150 | DUF3850 domain-containing protein | |||
| 3155 | M | M.SspZ54ORF6040P (100% identity) | M.SenSI185ORF3155P | |
| 3160 | replication endonuclease | |||
| 9245 | phosphohydrolase | |||
| 9250 | M | M.SspZ54DcmP (100% identity) | CCWGG | M.SenSI185DcmP |
| 9255 | V | V.Sensp14178DcmP (100% identity) | V.SenSI185DcmP | |
| 9260 | drug/metabolite exporter YedA | |||
| 17530 | DUF1317 family protein | |||
| 17535 | M | M.Sensp14152ORF18590P (100% identity) | M.SenSI185ORF17535P | |
| 17540 | 74 aa hypothetical protein | |||
| 19725 | YebC/PmpR family DNA-binding transcriptional | |||
| 19730 | R | Sensp14178ORF19855P (100% identity) | SenSI185ORF19730P | |
| 19735 | 347 aa hypothetical protein | |||
| 19770 | RNA polymerase subunit sigma | |||
| 19775 | R | Sens733ORF18925P (100% identity) | SenSI185ORF19775P | |
| 19780 | malate transporter | |||
| plasmid pSI85-1 | ||||
| 23340 | thermonuclease family protein | |||
| 23345 | M | M.YpsF1ORFCP (100% identity) | M.SenSI185ORF23345P | |
| 23350 | 55 aa hypothetical protein | |||
| 23805 | 48 aa hypothetical protein | |||
| 23810 | M | M.YpsF1ORFBP (100% identity) | M.SenSI185ORF23810P | |
| 23815 | 202 aa hypothetical protein | |||
| 23920 | DNA-binding protein | |||
| 23925 | M | M.YpsF1ORFDP (71% identity) | M.SenSI185ORF23925P | |
| 23930 | IS6-like element IS26 family transposase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17100 | 33 aa hypothetical protein | |||
| 17105 | R | Sensp14154ORF17330P (100% identity) | CAGAG | SenSI185ORF17110P |
| 17110 | M | M.Sensp14178ORF17290P (100% identity) | CAGAG | M.SenSI185ORF17110P |
| 17115 | MFS transporter | |||
| 19800 | S8 family peptidase | |||
| 19805 | M | M.Sensp14178ORF19930P (100% identity) | CGGAAC | M.SenSI185ORF19805P |
| 19810 | R | Sensp14178ORF19930P (100% identity) | CGGAAC | SenSI185ORF19805P |
| 19815 | integrase arm-type DNA-binding domain-containing | |||