Salmonella enterica subsp. enterica serovar Indiana SI115 |
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Putative Salmonella enterica subsp. enterica serovar Indiana SI115 RM systems
Ref: Chen,Z. unpublished
REBASE ref # 29897
| Sequence length: | GenBank #: | |
| Chromosome: | 4,783,488 bp | CP050762 |
| plasmid pSI115-1: | 190,597 bp | CP050763 |
REBASE acronym: SenSI115
Org_num: 41090
All begin HEC82_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1740 | cell division protein DamX | |||
| 1745 | M | M.StyTDamP (100% identity) | GATC | M.SenSI115DamP |
| 1750 | ribulose-phosphate 3-epimerase | |||
| 2235 | DUF2556 family protein | |||
| 2240 | M | M.Sensp14178ORF2230P (100% identity) | ATGCAT | M.SenSI115ORF2240P |
| 2245 | DNA-binding transcriptional regulator Fis | |||
| 3150 | DUF3850 domain-containing protein | |||
| 3155 | M | M.SspZ54ORF6040P (100% identity) | M.SenSI115ORF3155P | |
| 3160 | replication endonuclease | |||
| 9235 | phosphohydrolase | |||
| 9240 | M | M.SspZ54DcmP (100% identity) | CCWGG | M.SenSI115DcmP |
| 9245 | V | V.Sensp14178DcmP (100% identity) | V.SenSI115DcmP | |
| 9250 | drug/metabolite exporter YedA | |||
| 17825 | regulator | |||
| 17830 | M | M.SenSI196ORF17850P (100% identity) | M.SenSI115ORF17830P | |
| 17835 | DNA methyltransferase | |||
| 17830 | class I SAM-dependent methyltransferase | |||
| 17835 | M | M.SenSI196ORF17855P (100% identity) | M.SenSI115ORF17835P | |
| 17840 | 74 aa hypothetical protein | |||
| 20010 | YebC/PmpR family DNA-binding transcriptional | |||
| 20015 | R | Sensp14178ORF19855P (100% identity) | SenSI115ORF20015P | |
| 20020 | 347 aa hypothetical protein | |||
| 20055 | RNA polymerase subunit sigma | |||
| 20060 | R | Sens733ORF18925P (100% identity) | SenSI115ORF20060P | |
| 20065 | malate transporter | |||
| plasmid pSI115-1 | ||||
| 23135 | M | M.YpsF1ORFBP (100% identity) | M.SenSI115ORF23135P | |
| 23140 | 202 aa hypothetical protein | |||
| 23245 | DNA-binding protein | |||
| 23250 | M | M.YpsF1ORFDP (100% identity) | M.SenSI115ORF23250P | |
| 23255 | 284 aa hypothetical protein | |||
| 23910 | 55 aa hypothetical protein | |||
| 23915 | M | M.YpsF1ORFCP (100% identity) | M.SenSI115ORF23915P | |
| 23920 | thermonuclease family protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17075 | 33 aa hypothetical protein | |||
| 17080 | R | Sensp14154ORF17330P (100% identity) | CAGAG | SenSI115ORF17085P |
| 17085 | M | M.Sensp14178ORF17290P (100% identity) | CAGAG | M.SenSI115ORF17085P |
| 17090 | MFS transporter | |||
| 20085 | S8 family peptidase | |||
| 20090 | M | M.Sensp14178ORF19930P (100% identity) | CGGAAC | M.SenSI115ORF20090P |
| 20095 | R | Sensp14178ORF19930P (100% identity) | CGGAAC | SenSI115ORF20090P |
| 20100 | integrase arm-type DNA-binding domain-containing | |||