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Putative Salmonella enterica subsp. enterica serovar Indiana SI96 RM systems
Ref: Chen,Z. unpublished
REBASE ref # 29897
Sequence length: | GenBank #: | |
Chromosome: | 4,782,837 bp | CP050777 |
plasmid pSI96-1: | 190,811 bp | CP050778 |
REBASE acronym: SenSI196
Org_num: 41097
All begin HEC78_
Type II | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
1750 | cell division protein DamX | |||
1755 | M | M.StyTDamP (100% identity) | GATC | M.SenSI196DamP |
1760 | ribulose-phosphate 3-epimerase | |||
2245 | DUF2556 family protein | |||
2250 | M | M.Sensp14178ORF2230P (100% identity) | ATGCAT | M.SenSI196ORF2250P |
2255 | DNA-binding transcriptional regulator Fis | |||
3160 | DUF3850 domain-containing protein | |||
3165 | M | M.SspZ54ORF6040P (100% identity) | M.SenSI196ORF3165P | |
3170 | replication endonuclease | |||
9245 | phosphohydrolase | |||
9250 | M | M.SspZ54DcmP (100% identity) | CCWGG | M.SenSI196DcmP |
9255 | V | V.Sensp14178DcmP (100% identity) | V.SenSI196DcmP | |
9260 | drug/metabolite exporter YedA | |||
17845 | regulator | |||
17850 | M | M.SenSI115ORF17830P (100% identity) | M.SenSI196ORF17850P | |
17855 | DNA methyltransferase | |||
17850 | class I SAM-dependent methyltransferase | |||
17855 | M | M.SenSI115ORF17835P (100% identity) | M.SenSI196ORF17855P | |
17860 | 74 aa hypothetical protein | |||
20035 | YebC/PmpR family DNA-binding transcriptional | |||
20040 | R | Sensp14178ORF19855P (100% identity) | SenSI196ORF20040P | |
20045 | 347 aa hypothetical protein | |||
20080 | RNA polymerase subunit sigma | |||
20085 | R | Sens733ORF18925P (100% identity) | SenSI196ORF20085P | |
20090 | malate transporter | |||
plasmid pSI96-1 | ||||
23375 | 284 aa hypothetical protein | |||
23380 | M | M.YpsF1ORFDP (100% identity) | M.SenSI196ORF23380P | |
23385 | DNA-binding protein | |||
23490 | 202 aa hypothetical protein | |||
23495 | M | M.YpsF1ORFBP (100% identity) | M.SenSI196ORF23495P | |
23500 | 48 aa hypothetical protein | |||
23730 | thermonuclease family protein | |||
23735 | M | M.YpsF1ORFCP (100% identity) | M.SenSI196ORF23735P | |
23740 | 55 aa hypothetical protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
17095 | 33 aa hypothetical protein | |||
17100 | R | Sensp14154ORF17330P (100% identity) | CAGAG | SenSI196ORF17105P |
17105 | M | M.Sensp14178ORF17290P (100% identity) | CAGAG | M.SenSI196ORF17105P |
17110 | MFS transporter | |||
20110 | S8 family peptidase | |||
20115 | M | M.Sensp14178ORF19930P (100% identity) | CGGAAC | M.SenSI196ORF20115P |
20120 | R | Sensp14178ORF19930P (100% identity) | CGGAAC | SenSI196ORF20115P |
20125 | integrase arm-type DNA-binding domain-containing |