Salmonella enterica subsp. enterica serovar Indiana SI173 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Salmonella enterica subsp. enterica serovar Indiana SI173 RM systems
Ref: Chen,Z. unpublished
REBASE ref # 29897
| Sequence length: | GenBank #: | |
| Chromosome: | 4,721,555 bp | CP050757 |
| plasmid pSI173-1: | 87,883 bp | CP050758 |
REBASE acronym: SenSI173
Org_num: 41092
All begin HEC84_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1910 | cell division protein DamX | |||
| 1915 | M | M.StyTDamP (100% identity) | GATC | M.SenSI173DamP |
| 1920 | ribulose-phosphate 3-epimerase | |||
| 2405 | DUF2556 family protein | |||
| 2410 | M | M.Sensp14178ORF2230P (100% identity) | ATGCAT | M.SenSI173ORF2410P |
| 2415 | DNA-binding transcriptional regulator Fis | |||
| 3305 | DUF3850 domain-containing protein | |||
| 3310 | M | M.SspZ54ORF6040P (100% identity) | M.SenSI173ORF3310P | |
| 3315 | replication endonuclease | |||
| 9390 | phosphohydrolase | |||
| 9395 | M | M.SspZ54DcmP (100% identity) | CCWGG | M.SenSI173DcmP |
| 9400 | V | V.Sensp14178DcmP (100% identity) | V.SenSI173DcmP | |
| 9405 | drug/metabolite exporter YedA | |||
| 19530 | YebC/PmpR family DNA-binding transcriptional | |||
| 19535 | R | Sensp14178ORF19855P (100% identity) | SenSI173ORF19535P | |
| 19540 | 347 aa hypothetical protein | |||
| 19575 | RNA polymerase subunit sigma | |||
| 19580 | R | Sens733ORF18925P (100% identity) | SenSI173ORF19580P | |
| 19585 | malate transporter | |||
| plasmid pSI173-1 | ||||
| 22765 | 102 aa hypothetical protein | |||
| 22770 | M | M.SflFF3ORF25360P (100% identity) | M.SenSI173ORF22770P | |
| 22775 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17260 | 33 aa hypothetical protein | |||
| 17265 | R | Sensp14154ORF17330P (100% identity) | CAGAG | SenSI173ORF17270P |
| 17270 | M | M.Sensp14178ORF17290P (100% identity) | CAGAG | M.SenSI173ORF17270P |
| 17275 | MFS transporter | |||
| 19605 | S8 family peptidase | |||
| 19610 | M | M.Sensp14178ORF19930P (100% identity) | CGGAAC | M.SenSI173ORF19610P |
| 19615 | R | Sensp14178ORF19930P (100% identity) | CGGAAC | SenSI173ORF19610P |
| 19620 | integrase arm-type DNA-binding domain-containing | |||