Salmonella enterica subsp. enterica serovar Enteritidis SE104 |
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Putative Salmonella enterica subsp. enterica serovar Enteritidis SE104 RM systems
Ref: Chen,Z. unpublished
REBASE ref # 29897
| Sequence length: | GenBank #: | |
| Chromosome: | 4,679,142 bp | CP050712 |
| plasmid pSE104-1: | 106,652 bp | CP050713 |
REBASE acronym: SenSE104
Org_num: 41081
All begin HEC97_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19380 | AAA family ATPase | |||
| 19385 | M | M.SspSAL045ORF19385P (100% identity) | GGYANNNNNNTCG | M.SenSE104ORF19385P |
| 19390 | S | S.StySBLI (100% identity) | GGYANNNNNNTCG | S.SenSE104ORF19385P |
| 19395 | R | StySBLI (100% identity) | GGYANNNNNNTCG | SenSE104ORF19385P |
| 19400 | DUF91 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1780 | cell division protein DamX | |||
| 1785 | M | M.StyTDamP (100% identity) | GATC | M.SenSE104DamP |
| 1790 | ribulose-phosphate 3-epimerase | |||
| 2270 | DUF2556 family protein | |||
| 2275 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenSE104ORF2275P |
| 2280 | DNA-binding transcriptional regulator Fis | |||
| 8905 | PerC family transcriptional regulator | |||
| ??? | M | M.SspSAL045ORF8900P (100% identity) | M.SenSE104ORF8910P | |
| 8915 | RusA family crossover junction | |||
| 13770 | drug/metabolite exporter YedA | |||
| 13775 | V | V.StyUK1DcmP (100% identity) | V.SenSE104DcmP | |
| 13780 | M | M.SspZ69DcmP (100% identity) | CCWGG | M.SenSE104DcmP |
| 13785 | phosphohydrolase | |||
| 19510 | YebC/PmpR family DNA-binding transcriptional | |||
| 19515 | R | SspSAL045ORF19515P (100% identity) | SenSE104ORF19515P | |
| 19520 | IS3 family transposase | |||
| plasmid pSE104-1 | ||||
| 22970 | 97 aa hypothetical protein | |||
| 22975 | M | M.Xca80ORFEP (100% identity) | M.SenSE104ORF22975P | |
| 22980 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17285 | 33 aa hypothetical protein | |||
| 17290 | R | SspSAL045ORF17295P (100% identity) | CAGAG | SenSE104ORF17295P |
| 17295 | M | M.SspSAL045ORF17295P (100% identity) | CAGAG | M.SenSE104ORF17295P |
| 17300 | MFS transporter | |||