Xylella fastidiosa ATCC 35879 |
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Putative Xylella fastidiosa ATCC 35879 RM systems
Ref: Chen,J. et al. Curr. Microbiol. (2020) In press
REBASE ref # 30696
Complete sequence: 2,565,504 bp
GenBank #: CP044352
REBASE acronym: Xfa35879
Org_num: 41193
All begin F7G16_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1300 | bifunctional aconitate hydratase | |||
| ??? | R | XfasSLORF1215P (100% identity) | Xfa35879ORF1345P | |
| ??? | S | S.XfasSLORF1215P (100% identity) | S.Xfa35879ORF1345P | |
| ??? | M | M.XfaSLORFBP (95% identity) | M.Xfa35879ORF1345P | |
| 1355 | biotin/lipoyl-binding protein | |||
| 11760 | SLATT domain-containing protein | |||
| 11765 | R | Xfav13ORF11050P (100% identity) | Xfa35879ORF11775P | |
| 11770 | S | S.XfasSLORF11075P (100% identity) | S.Xfa35879ORF11775P | |
| 11775 | M | M.XfasSLORF11075P (100% identity) | M.Xfa35879ORF11775P | |
| 11780 | HNH endonuclease | |||
| 11780 | HNH endonuclease | |||
| 11785 | R | XfasSLORF11100P (100% identity) | Xfa35879ORF11800P | |
| 11790 | S | S.Xfav13ORF11075P (87% identity) | S.Xfa35879ORF11800P | |
| 11795 | 88 aa hypothetical protein | |||
| 11800 | M | M.Xfav13ORF11075P (100% identity) | M.Xfa35879ORF11800P | |
| 11805 | LysE family translocator | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3205 | response regulator | |||
| 3210 | M | M.XfasSLORF3075P (100% identity) | M.Xfa35879ORF3210P | |
| 3215 | 245 aa hypothetical protein | |||
| 3925 | tryptophan--tRNA ligase | |||
| ??? | M | M.Xfav13ORF8800P (100% identity) | M.Xfa35879ORF3930P | |
| ??? | R | Xfa8742ORF3690P (100% identity) | Xfa35879ORF3930P | |
| 3950 | DNA primase | |||
| 4155 | 89 aa hypothetical protein | |||
| 4160 | R | Xfav25ORF3130P (100% identity) | TTCGAA | Xfa35879ORF4165P |
| 4165 | M | M.Xfav25ORF3130P (98% identity) | TTCGAA | M.Xfa35879ORF4165P |
| 4175 | DUF4102 domain-containing protein | |||
| 5640 | type II toxin-antitoxin system RelE/ParE family | |||
| 5645 | M | M.Xfav13ORF7170P (100% identity) | M.Xfa35879ORF5645P | |
| 5650 | low molecular weight phosphotyrosine protein | |||
| 5720 | 79 aa hypothetical protein | |||
| 5725 | M | M.Xfav13ORF7095P (100% identity) | M.Xfa35879ORF5725P | |
| 5730 | lysozyme | |||
| 9425 | DNA replication protein DnaD | |||
| ??? | M | M.Xfav13ORF5610P (100% identity) | M.Xfa35879ORF9430P | |
| 9435 | Ax21 family protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8250 | 3-oxoacyl-ACP synthase III | |||
| 8255 | M | M.Xfav13ORF4440P (100% identity) | M.Xfa35879ORF8255P | |
| 8260 | 72 aa hypothetical protein | |||
| 8265 | R | XfaWM11ORF4380P (100% identity) | Xfa35879ORF8255P | |
| 8270 | alpha/beta fold hydrolase | |||