Clavibacter michiganensis subsp. capsici 1207 |
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Putative Clavibacter michiganensis subsp. capsici 1207 RM systems
Ref: Hwang,I.S. et al. Mol. Plant Pathol. (2020) In press
REBASE ref # 30401
Complete sequence: 3,102,272 bp
GenBank #: CP048045
REBASE acronym: Cmi1207
Org_num: 40316
All begin GW572_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1920 | DEAD/DEAH box helicase | |||
| 1925 | M | M.Cmi1106ORF1920P (91% identity) | M.Cmi1207ORF1925P | |
| 1930 | DUF4190 domain-containing protein | |||
| 4505 | 401 aa hypothetical protein | |||
| 4510 | M | M.Xtr513ORF13695P (35% identity) | M.Cmi1207ORF4510P | |
| 4515 | 79 aa hypothetical protein | |||
| 4540 | 109 aa hypothetical protein | |||
| 4545 | M | M.Llub2ORF5920P (38% identity) | M.Cmi1207ORF4545P | |
| 4550 | RusA family crossover junction | |||
| 11200 | SCO1664 family protein | |||
| 11205 | R | CmiA6096ORF13435P (92% identity) | Cmi1207ORF11210P | |
| 11210 | M | M.CmiA6096ORF13435P (96% identity) | M.Cmi1207ORF11210P | |
| 11215 | V | V.CmiA6096ORF13435P (96% identity) | V.Cmi1207ORF11210P | |
| 11220 | redox-regulated ATPase YchF | |||
| 14500 | dCTP deaminase | |||
| 14510 | RM | Csp17035ORF16410P (72% identity) | Cmi1207ORF14510P | |
| 14515 | S | S.Pac2230ORF11365P (34% identity) | S.Cmi1207ORF14510P | |
| 14520 | FadR family transcriptional regulator | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 14535 | 67 aa hypothetical protein | |||
| 14540 | R | AspF3372MrrP (50% identity) | Cmi1207MrrP | |
| 14545 | Fpg/Nei family DNA glycosylase | |||