Escherichia coli 52148 |
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Putative Escherichia coli 52148 RM systems
Ref: Bitar,i. unpublished
REBASE ref # 28497
| Sequence length: | GenBank #: | |
| Chromosome: | 4,859,628 bp | CP050382 |
| plasmid p52148_NDM_5: | 121,872 bp | CP050384 |
REBASE acronym: Eco52148
Org_num: 39985
All begin HB638_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2725 | MmcB family DNA repair protein | |||
| 2730 | R | EcoCase6ORF480P (100% identity) | CAAYNNNNNCTGC | Eco52148ORF2735P |
| 2735 | M | M.SflN116ORF3940P (100% identity) | CAAYNNNNNCTGC | M.Eco52148ORF2735P |
| 2740 | S | S.SflN116ORF3940P (100% identity) | CAAYNNNNNCTGC | S.Eco52148ORF2735P |
| 2745 | AAA family ATPase | |||
| 11830 | IS1 family transposase | |||
| 11835 | M | M.EcoSB43ORF10515P (100% identity) | M.Eco52148ORF11835P | |
| 11840 | S | S1.EcoSB43ORF10515P (100% identity) | S.Eco52148ORF11835P | |
| 11845 | YecA family protein | |||
| 11850 | cold shock domain-containing protein | |||
| 11855 | R | EcoSB43ORF10515P (100% identity) | Eco52148ORF11835P | |
| 11860 | M48 family metallopeptidase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4195 | cell division protein DamX | |||
| 4200 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco52148DamP |
| 4205 | ribulose-phosphate 3-epimerase | |||
| 4820 | DUF2556 family protein | |||
| 4825 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.Eco52148ORF4825P |
| 4830 | DNA-binding transcriptional regulator Fis | |||
| 11575 | phosphohydrolase | |||
| 11580 | M | M.EcosEC5DcmP (100% identity) | CCWGG | M.Eco52148DcmP |
| 11585 | V | V.EcosEC7DcmP (100% identity) | V.Eco52148DcmP | |
| 11590 | drug/metabolite exporter YedA | |||
| 20180 | zinc ribbon domain-containing protein | |||
| 20185 | M | M.EcosEC31ORF18555P (100% identity) | GGTACC | M.Eco52148ORF20185P |
| 20190 | tyrosine-type recombinase/integrase | |||
| 20345 | phage lysis protein EssD | |||
| 20350 | M | M.Sso63633ORF22290P (100% identity) | M.Eco52148ORF20350P | |
| 20355 | 67 aa hypothetical protein | |||
| 20390 | LexA family transcriptional regulator | |||
| 20395 | M | M.KpnHs33ORF24645P (100% identity) | GATC | M.Eco52148ORF20395P |
| 20400 | PerC family transcriptional regulator | |||
| plasmid p52148_NDM_5 | ||||
| 23775 | 73 aa hypothetical protein | |||
| 23780 | M | M.KpnVA569ORF28145P (100% identity) | M.Eco52148ORF23780P | |
| 23785 | 102 aa hypothetical protein | |||