Salmonella enterica subsp. enterica serovar Anatum Sal-3948 |
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Putative Salmonella enterica subsp. enterica serovar Anatum Sal-3948 RM systems
Ref: Feng,Y. and Chiu,C.-H. unpublished
REBASE ref # 23189
Complete sequence: 4,773,053 bp
GenBank #: CP045513
REBASE acronym: Sen3948
Org_num: 41076
All begin GE197_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 6870 | restriction endonuclease | |||
| 6875 | R | SenNCTR462ORF2380P (100% identity) | CCANNNNNNNNTGAG | Sen3948ORF6880P |
| 6880 | M | M.SenNCTR462ORF2380P (99% identity) | CCANNNNNNNNTGAG | M.Sen3948ORF6880P |
| 6885 | S | S.SenNCTR462ORF2380P (100% identity) | CCANNNNNNNNTGAG | S.Sen3948ORF6880P |
| 6890 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 475 | RusA family crossover junction | |||
| 480 | M | M.SenS16ORF9325P (100% identity) | M.Sen3948ORF480P | |
| 485 | PerC family transcriptional regulator | |||
| 540 | ead/Ea22-like family protein | |||
| 545 | M | M.SenSH7ORF6615P (100% identity) | M.Sen3948ORF545P | |
| 550 | Eaa protein | |||
| 7015 | YebC/PmpR family DNA-binding transcriptional | |||
| 7020 | R | Sens24219ORF19960P (100% identity) | Sen3948ORF7020P | |
| 7025 | sce7725 family protein | |||
| 12235 | cell division protein DamX | |||
| 12240 | M | M.StyTDamP (100% identity) | GATC | M.Sen3948DamP |
| 12245 | ribulose-phosphate 3-epimerase | |||
| 12720 | DUF2556 domain-containing protein | |||
| 12725 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen3948ORF12725P |
| 12730 | DNA-binding transcriptional regulator Fis | |||
| 15975 | TraR/DksA family transcriptional regulator | |||
| 15980 | M | M.Sen931ORF15850P (100% identity) | M.Sen3948ORF15980P | |
| 15985 | replication endonuclease | |||
| 19645 | phosphohydrolase | |||
| 19650 | M | M.SenNCTR462DcmP (100% identity) | CCWGG | M.Sen3948DcmP |
| 19655 | V | V.StyUK1DcmP (100% identity) | V.Sen3948DcmP | |
| 19660 | drug/metabolite exporter YedA | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4630 | 33 aa hypothetical protein | |||
| 4635 | R | SenNCTR462ORF9180P (99% identity) | CAGAG | Sen3948ORF4640P |
| 4640 | M | M.SenST224ORF2660P (100% identity) | CAGAG | M.Sen3948ORF4640P |
| 4645 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6865 | BrnT family toxin | |||
| 6870 | R | SenNCTR462MrrP (100% identity) | Sen3948MrrP | |
| 6875 | type I restriction-modification system | |||