Escherichia coli 15RDA-Livestock feces-ECO087 |
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Putative Escherichia coli 15RDA-Livestock feces-ECO087 RM systems
Ref: Cha,M.-H. and Woo,G.-J. unpublished
REBASE ref # 30290
Complete sequence: 5,572,079 bp
GenBank #: CP043541
REBASE acronym: Eco087
Org_num: 39981
All begin F0L67_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 10290 | restriction endonuclease | |||
| 10295 | M | M.Esp9308ORFIP (100% identity) | M.Eco087ORF10295P | |
| 10300 | S | S.EcosEC9ORF12765P (100% identity) | S.Eco087ORF10295P | |
| 10305 | R | EcosEC9ORF12765P (100% identity) | Eco087ORF10295P | |
| 10310 | endoribonuclease SymE | |||
| 27580 | 3-phosphatase | |||
| 27585 | R | EcoS321ORF25465P (100% identity) | Eco087ORF27595P | |
| 27590 | S | S.EcoPI7ORF24305P (100% identity) | S.Eco087ORF27595P | |
| 27595 | M | M.EcoS321ORF25465P (100% identity) | M.Eco087ORF27595P | |
| 27600 | type II toxin-antitoxin system Phd/YefM family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1315 | 102 aa hypothetical protein | |||
| 1320 | M | M.SflN101ORF24625P (100% identity) | M.Eco087ORF1320P | |
| 1325 | 73 aa hypothetical protein | |||
| 1650 | 73 aa hypothetical protein | |||
| 1655 | M | M.SenS318ORF60P (100% identity) | M.Eco087ORF1655P | |
| 1660 | 102 aa hypothetical protein | |||
| 6475 | DUF1173 domain-containing protein | |||
| 6480 | M | M.YpsF1ORFCP (100% identity) | M.Eco087ORF6480P | |
| 6485 | thermonuclease family protein | |||
| 10485 | HNH endonuclease | |||
| 10490 | R | EcosEC9ORF12570P (100% identity) | Eco087ORF10490P | |
| 10495 | 332 aa hypothetical protein | |||
| 12495 | cell division protein DamX | |||
| 12500 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco087DamP |
| 12505 | ribulose-phosphate 3-epimerase | |||
| 13565 | phage lysis protein EssD | |||
| 13570 | M | M.Sso63633ORF22290P (100% identity) | M.Eco087ORF13570P | |
| 13575 | 67 aa hypothetical protein | |||
| 16045 | DUF2556 domain-containing protein | |||
| 16050 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.Eco087ORF16050P |
| 16055 | DNA-binding transcriptional regulator Fis | |||
| 16810 | 108 aa hypothetical protein | |||
| 16815 | M | M.YpsF1ORFBP (100% identity) | M.Eco087ORF16815P | |
| 16820 | 202 aa hypothetical protein | |||
| 17045 | drug/metabolite exporter YedA | |||
| 17050 | V | V.EcosEC7DcmP (100% identity) | V.Eco087DcmP | |
| 17055 | M | M.SdySWHE2DcmP (100% identity) | CCWGG | M.Eco087DcmP |
| 17060 | phosphohydrolase | |||
| 18680 | LexA family transcriptional regulator | |||
| 18685 | M | M.EcoCRE1ORF17795P (99% identity) | GATC | M.Eco087ORF18685P |
| 18690 | PerC family transcriptional regulator | |||
| 20060 | 76 aa hypothetical protein | |||
| 20065 | M | M.Sso8361ORFCP (100% identity) | M.Eco087ORF20065P | |
| 20070 | 269 aa hypothetical protein | |||
| 24715 | 121 aa hypothetical protein | |||
| 24720 | R | Sso8033ORF3755P (100% identity) | Eco087ORF24725P | |
| ??? | M | M.SflSTLE1ORF5615P (100% identity) | M.Eco087ORF24725P | |
| 24730 | conjugal transfer protein | |||
| 25540 | conjugal transfer protein TraG | |||
| 25545 | R | SflN107ORF20240P (100% identity) | Eco087ORF25545P | |
| 25550 | cell surface composition regulator GlgS | |||
| 26285 | 284 aa hypothetical protein | |||
| 26290 | M | M.YpsF1ORFDP (100% identity) | M.Eco087ORF26290P | |
| 26295 | DNA-binding protein | |||
| 27080 | 63 aa hypothetical protein | |||
| 27095 | M | M.EcoD5ORF24230P (98% identity) | M.Eco087ORF27095P | |
| 27105 | DNA breaking-rejoining protein | |||