Gordonia terrae RL-JC02 |
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Putative Gordonia terrae RL-JC02 RM systems
Ref: Ren,L. et al. unpublished
REBASE ref # 30441
| Sequence length: | GenBank #: | |
| Chromosome: | 5,185,803 bp | CP049836 |
| plasmid pPAE01: | 127,051 bp | CP049837 |
REBASE acronym: GteJC02
Org_num: 40386
All begin G8C36_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3560 | TetR/AcrR family transcriptional regulator | |||
| 3565 | M | M.GhoLY01ORF21200P (100% identity) | M.GteJC02ORF3565P | |
| ??? | S | S.GhoLY01ORF21200P (73% identity) | S.GteJC02ORF3565P | |
| 3575 | 95 aa hypothetical protein | |||
| 3580 | 5-methylcytosine-specific restriction system | |||
| 3585 | ATP/GTP-binding protein | |||
| 3590 | IS21 family transposase | |||
| 3595 | ATP-binding protein | |||
| 3600 | 126 aa hypothetical protein | |||
| 3605 | 326 aa hypothetical protein | |||
| 3610 | R | GhoLY01ORF21200P (100% identity) | GteJC02ORF3565P | |
| 3615 | 295 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 12155 | 125 aa hypothetical protein | |||
| 12160 | M | M.GhoLY01ORF12600P (97% identity) | M.GteJC02ORF12160P | |
| 12165 | type IV toxin-antitoxin system AbiEi family | |||
| 12840 | DUF3427 domain-containing protein | |||
| 12845 | M | M.GhoLY01ORF11910P (98% identity) | M.GteJC02ORF12845P | |
| 12850 | R | GhoLY01ORF11910P (99% identity) | GteJC02ORF12845P | |
| 12855 | helix-turn-helix transcriptional regulator | |||
| 21160 | HIT family protein | |||
| 21165 | M | M.GhoLY01ORF3590P (88% identity) | M.GteJC02ORF21165P | |
| 21170 | 279 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pPAE01 | ||||
| 23840 | 119 aa hypothetical protein | |||
| 23845 | M | M.RruY14ORF26265P (21% identity) | M.GteJC02ORF23845AP | |
| 23850 | site-specific integrase | |||
| 23855 | 598 aa hypothetical protein | |||
| 23860 | 623 aa hypothetical protein | |||
| 23865 | 143 aa hypothetical protein | |||
| 23870 | NgoFVII family restriction endonuclease | |||
| 23875 | class I SAM-dependent DNA methyltransferase | |||
| 23880 | ATP-binding protein | |||
| 23885 | M | M.RspDMF1ORF26510P (58% identity) | M.GteJC02ORF23845BP | |
| 23890 | R | Gam43602ORF20150P (90% identity) | GteJC02ORF23845P | |
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 12825 | AAA family ATPase | |||
| 12830 | R | GhoLY01ORF11925P (98% identity) | GteJC02ORF12830AP | |
| 12835 | IS256 family transposase | |||
| 12840 | R | Gsp100ORFAP (14% identity) | GteJC02ORF12830BP | |
| 12845 | N-6 DNA methylase | |||