Rhodococcus fascians A21d2 |
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Putative Rhodococcus fascians A21d2 RM systems
Ref: Savory,E.A. et al. unpublished
REBASE ref # 30633
| Sequence length: | GenBank #: | |
| Chromosome: | 5,667,798 bp | CP049748 |
| plasmid pA21d2: | 189,682 bp | CP049749 |
| plasmid unnamed1: | 76,960 bp | CP049750 |
| plasmid unnamed2: | 75,360 bp | CP049751 |
REBASE acronym: RfaA21d2
Org_num: 40939
All begin BH92_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 340 | ABC transporter ATP-binding protein | |||
| 345 | M | M.RfaA25fORF3450P (99% identity) | M.RfaA21d2ORF345P | |
| 350 | V | V.RfaA25fORF3450P (98% identity) | V.RfaA21d2ORF345P | |
| 355 | 67 aa hypothetical protein | |||
| 1900 | 254 aa hypothetical protein | |||
| 1905 | M | M.RfaA25fORF1585P (98% identity) | M.RfaA21d2ORF1905P | |
| 1910 | R | RfaA25fORF1585P (98% identity) | RfaA21d2ORF1905P | |
| 1915 | LysR family transcriptional regulator | |||
| 7235 | GIY-YIG nuclease family protein | |||
| 7240 | RM | RspM09ORF5072P (84% identity) | RfaA21d2ORF7240P | |
| 7245 | 222 aa hypothetical protein | |||
| 21045 | 167 aa hypothetical protein | |||
| 21050 | M | M.RfaA25fORF9470P (87% identity) | M.RfaA21d2ORF21050P | |
| 21055 | helix-turn-helix transcriptional regulator | |||
| 21280 | 443 aa hypothetical protein | |||
| 21285 | M | M.Asp7876ORFAP (63% identity) | M.RfaA21d2ORF21285P | |
| 21290 | RM | CmiCNK2ORF2618P (52% identity) | RfaA21d2ORF21285P | |
| 21295 | 118 aa hypothetical protein | |||
| plasmid pA21d2 | ||||
| 27160 | 279 aa hypothetical protein | |||
| 27165 | M | M.RspJG3ORFFP (90% identity) | M.RfaA21d2ORF27165P | |
| 27170 | 76 aa hypothetical protein | |||
| plasmid unnamed1 | ||||
| 27515 | 74 aa hypothetical protein | |||
| 27520 | RM | MchNBB4ORF4775P (70% identity) | RfaA21d2ORF27520P | |
| 27525 | NACHT domain-containing protein | |||
| plasmid unnamed2 | ||||
| 28210 | 558 aa hypothetical protein | |||
| 28215 | M | M.WneVSI01ORF8850P (47% identity) | M.RfaA21d2ORF28215P | |
| 28220 | Lsr2 family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21270 | restriction endonuclease | |||
| 21275 | R | Mru16372McrBP (38% identity) | RfaA21d2McrBP | |
| 21280 | R | RerXPMcrCP (41% identity) | RfaA21d2McrCP | |
| 21285 | class I SAM-dependent methyltransferase | |||