|
Putative Xanthomonas oryzae pv. oryzae IXO1088 RM systems
Ref: Kaur,A. et al. unpublished
REBASE ref # 30776
Complete sequence: 5,093,052 bp
GenBank #: CP040687
REBASE acronym: Xci1088
Org_num: 41434
All begin IXO1088_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
7950 | type II toxin-antitoxin system RelE/ParE family | |||
7955 | S | S2.Xor1104ORF7540P (100% identity) | S2.Xci1088ORF7965P | |
7960 | S | S.Xor174ORF7620P (39% identity) | S1.Xci1088ORF7965P | |
7965 | M | M.Xor233ORF7585P (100% identity) | M.Xci1088ORF7965P | |
7970 | Abi family protein | |||
7975 | R | Xor233ORF7585P (100% identity) | Xci1088ORF7965P | |
7980 | 87 aa hypothetical protein | |||
7985 | type II toxin-antitoxin system RelE/ParE family | |||
7990 | R | XorKKORF8535P (100% identity) | Xci1088ORF8005P | |
7995 | helix-turn-helix transcriptional regulator | |||
8000 | 240 aa hypothetical protein | |||
8005 | M | M.Xor233ORF7625P (100% identity) | M.Xci1088ORF8005P | |
8010 | S | S1.Xor1104ORF7580P (100% identity) | S1.Xci1088ORF8005P | |
8015 | IS30-like element IS1112b family transposase | |||
8020 | S | S3.Xor1104ORF7580P (100% identity) | S3.Xci1088ORF8005P | |
8025 | 61 aa hypothetical protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
16890 | 253 aa hypothetical protein | |||
16895 | M | M.XorYN24ORF155P (100% identity) | M.Xci1088ORF16895P | |
16905 | phage portal protein | |||
17760 | phage portal protein | |||
17770 | M | M.Xor233ORF16575P (100% identity) | M.Xci1088ORF17770P | |
17775 | 250 aa hypothetical protein | |||
22325 | 101 aa hypothetical protein | |||
22330 | R | XorPXO61ORF3170P (100% identity) | CGATCG | Xci1088ORF22335P |
22335 | M | M.XorPXO61ORF3170P (100% identity) | CGATCG | M.Xci1088ORF22335P |
22340 | V | V.XorPXO61ORF3170P (100% identity) | V.Xci1088ORF22335P | |
22345 | MobC family plasmid mobilization relaxosome | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
2720 | alpha/beta fold hydrolase | |||
2725 | R | XorYN24ORF9770P (100% identity) | Xci1088ORF2730P | |
??? | M | M.Xor4509ORF2855P (100% identity) | M.Xci1088ORF2730P | |
2740 | Fic family protein |